RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 ZNF580Q9UK33 172 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 CENPXA8MT69 81 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
COMMD4-219ENST00000567399 KBTBD11O94819 623 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 KRASP01116 189 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 ELANEP08246 267 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 RND3P61587 244 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 FOXE3Q13461 319 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-219ENST00000567399 AKIRIN2Q53H80 203 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 OR4A5Q8NH83 315 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 FAM110DQ8TAY7 271 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-219ENST00000567399 S100ZQ8WXG8 99 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 ZFP57Q9NU63 452 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 SLC2A8Q9NY64 477 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 FOXA2Q9Y261 457 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-219ENST00000567399 FBXO7Q9Y3I1 522 aa11.9□□□□□ -0.5
COMMD4-219ENST00000567399 C3orf85A0A1B0GTC6 90 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 SNAPC5O75971 98 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 IGHG4P01861 327 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 APELAP0DMC3 54 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 MAS1LP35410 378 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 G6PCP35575 357 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 BAK1Q16611 211 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 TRIM16LQ309B1 348 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 PUSL1Q8N0Z8 303 aaKnown RBP11.89□□□□□ -0.51
COMMD4-219ENST00000567399 OR5T1Q8NG75 326 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 OR4F17Q8NGA8 305 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
COMMD4-219ENST00000567399 DEDD2Q8WXF8 326 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 FYTTD1Q96QD9 318 aaKnown RBP11.89□□□□□ -0.51
COMMD4-219ENST00000567399 OR4F4Q96R69 305 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 PTTG2Q9NZH5 202 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
COMMD4-219ENST00000567399 MARCH11A6NNE9 402 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 ATG12O94817 140 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 RPLP1P05386 114 aaKnown RBP11.88□□□□□ -0.51
COMMD4-219ENST00000567399 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-219ENST00000567399 RPL8P62917 257 aaKnown RBP11.88□□□□□ -0.51
COMMD4-219ENST00000567399 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 LINC00299Q6ZSB3 139 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 SGPP2Q8IWX5 399 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 OR5M8Q8NGP6 311 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 RNASE11Q8TAA1 199 aaKnown RBP11.88□□□□□ -0.51
COMMD4-219ENST00000567399 MS4A10Q96PG2 267 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 SPIN2AQ99865 258 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 SPIN2BQ9BPZ2 258 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 COMMD5Q9GZQ3 224 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 FAM212BQ9NTI7 297 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-219ENST00000567399 GPR132Q9UNW8 380 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 KCNIP3Q9Y2W7 256 aa11.88□□□□□ -0.51
COMMD4-219ENST00000567399 TET2Q6N021 2002 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 NAP1L6A6NFF2 107 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 H0Y980 276 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 UPK2O00526 184 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 RBMXL2O75526 392 aaKnown RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 TSPAN15O95858 294 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 PF4P02776 101 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 AKR1C4P17516 323 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 HLA-GP17693 338 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 RPL27AP46776 148 aaKnown RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 CRIP2P52943 208 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 RPL23AP62750 156 aaKnown RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 CFHR3Q02985 330 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 POU2AF1Q16633 256 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 SP6Q3SY56 376 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 TMED4Q7Z7H5 227 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 MINDY2Q8NBR6 621 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 RTBDNQ9BSG5 229 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-219ENST00000567399 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
COMMD4-219ENST00000567399 IL7P13232 177 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 PSMB8P28062 276 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 RAB9AP51151 201 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 AKR1C2P52895 323 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 PRR31Q5SQ13 230 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 ZNF695Q8IW36 515 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 OR4A16Q8NH70 328 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 CASTOR1Q8WTX7 329 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-219ENST00000567399 NAA60Q9H7X0 242 aa11.86□□□□□ -0.51
COMMD4-219ENST00000567399 IGLV1-40P01703 118 aa11.85□□□□□ -0.51
COMMD4-219ENST00000567399 TRGV3P03979 118 aa11.85□□□□□ -0.51
COMMD4-219ENST00000567399 OR5AC1P0C628 307 aa11.85□□□□□ -0.51
COMMD4-219ENST00000567399 TPPP2P59282 170 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms