RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 NECAP1Q8NC96 275 aa13.9□□□□□ -0.18
USB1-213ENST00000566292 VSTM2AQ8TAG5 236 aa13.9□□□□□ -0.18
USB1-213ENST00000566292 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
USB1-213ENST00000566292 ZNF257Q9Y2Q1 563 aa13.9□□□□□ -0.18
USB1-213ENST00000566292 DMRT1Q9Y5R6 373 aa13.9□□□□□ -0.18
USB1-213ENST00000566292 TNFSF12O43508 249 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 FCGR2CP31995 323 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 RPL27AP46776 148 aaKnown RBP13.89□□□□□ -0.19
USB1-213ENST00000566292 NEDD8Q15843 81 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 C15orf32Q32M92 178 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 LCN12Q6JVE5 192 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 SSX9Q7RTT3 188 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 SLC25A42Q86VD7 318 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 Q8N402 240 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 SECTM1Q8WVN6 248 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 CITED4Q96RK1 184 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 AUNIPQ9H7T9 357 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 PEMTQ9UBM1 199 aa13.89□□□□□ -0.19
USB1-213ENST00000566292 A0A0A6YYH2 397 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 A6NJ64 397 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 NPIPB5A8MRT5 1133 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 PPP5D1E7EU14 171 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 FCER2P06734 321 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 ZNF735P0CB33 412 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 MYOD1P15172 320 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 FANCD2OSQ96PS1 177 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 FYTTD1Q96QD9 318 aaKnown RBP13.88□□□□□ -0.19
USB1-213ENST00000566292 SLC2A9Q9NRM0 540 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 TENM2Q9NT68 2774 aa13.88□□□□□ -0.19
USB1-213ENST00000566292 AIREO43918 545 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 PPYP01298 95 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 AREGP15514 252 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 EDN2P20800 178 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 MAS1LP35410 378 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 MSMO1Q15800 293 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 HAGHQ16775 308 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 GTSCR1Q86UQ5 136 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 FBXL7Q9UJT9 491 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 LYSTQ99698 3801 aa13.87□□□□□ -0.19
USB1-213ENST00000566292 DPPA5A6NC42 116 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 CGB1A6NKQ9 187 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 NDUFB8O95169 186 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 HRASP01112 189 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 HLA-AP01891 365 aaKnown RBP13.86□□□□□ -0.19
USB1-213ENST00000566292 CRYGCP07315 174 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 TGFBR1P36897 503 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 TIMM50Q3ZCQ8 353 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 CD300EQ496F6 205 aaPredicted RBP13.86□□□□□ -0.19
USB1-213ENST00000566292 KCTD21Q4G0X4 260 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 SPAG16Q8N0X2 631 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 OR2K2Q8NGT1 345 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
USB1-213ENST00000566292 CCDC140Q96MF4 163 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 SLC5A7Q9GZV3 580 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 EDA2RQ9HAV5 297 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 DIABLOQ9NR28 239 aa13.86□□□□□ -0.19
USB1-213ENST00000566292 STARD9Q9P2P6 4700 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 IGHV3-23P01764 117 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 LYL1P12980 280 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 CTRB1P17538 263 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 PSMB6P28072 239 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 FXYD4P59646 89 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 RPL8P62917 257 aaKnown RBP13.85□□□□□ -0.19
USB1-213ENST00000566292 KLK9Q2XQG4 91 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 OR4A47Q6IF82 309 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 ZBTB34Q8NCN2 500 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 BET1LQ9NYM9 111 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 KLK9Q9UKQ9 250 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 S4R3C0 116 aa13.85□□□□□ -0.19
USB1-213ENST00000566292 MEIS3P1A6NDR6 274 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 C2orf70A6NJV1 201 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 ZNF785A8K8V0 405 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 SULT1C2O00338 296 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.19
USB1-213ENST00000566292 GGCTO75223 188 aaKnown RBP13.84□□□□□ -0.19
USB1-213ENST00000566292 OR2C1O95371 312 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 REG1AP05451 166 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 HLA-GP17693 338 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 FAM209BQ5JX69 171 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 ZNF818PQ6ZRF7 136 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 OR5AP2Q8NGF4 316 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 GIMAP1Q8WWP7 306 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 SPATA25Q9BR10 227 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 TUBA4BQ9H853 241 aa13.84□□□□□ -0.19
USB1-213ENST00000566292 RYR2Q92736 4967 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 TRAV3A0A0B4J244 114 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 XRCC3O43542 346 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 CBX5P45973 191 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 OR4A5Q8NH83 315 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 DYNLRB2Q8TF09 96 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 PLEKHA3Q9HB20 300 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 HRASLSQ9HDD0 168 aa13.83□□□□□ -0.2
USB1-213ENST00000566292 SACSQ9NZJ4 4579 aa13.82□□□□□ -0.2
USB1-213ENST00000566292 LGALS9O00182 355 aa13.82□□□□□ -0.2
USB1-213ENST00000566292 TMEM127O75204 238 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms