RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 NABP2Q9BQ15 211 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 NPFFR1Q9GZQ6 430 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 KLK15Q9H2R5 256 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 PPIAL4AQ9Y536 164 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 A0A1W2PPC1 479 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 F2Z2F3 143 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 HSPE1P61604 102 aaKnown RBP4.39□□□□□ -1.71
SMG1-211ENST00000565324 ZP4Q12836 540 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 CLEC2AQ6UVW9 174 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 TMEM242Q9NWH2 141 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 TNRC6AQ8NDV7 1962 aaKnown RBP4.39□□□□□ -1.71
SMG1-211ENST00000565324 CEP290O15078 2479 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 TAF1LQ8IZX4 1826 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 ZNF407Q9C0G0 2248 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 TM4SF4P48230 202 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 DCAF12L2Q5VW00 463 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 PNKDQ8N490 385 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 AMER3Q8N944 861 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 H3BUT2 72 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 PRKNO60260 465 aaPredicted RBP4.39□□□□□ -1.71
SMG1-211ENST00000565324 SSTR5P35346 364 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 SELENOHQ8IZQ5 122 aaKnown RBP4.39□□□□□ -1.71
SMG1-211ENST00000565324 DNAJC30Q96LL9 226 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 PAX1P15863 534 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 FXYD3Q14802 87 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 PAPPA2Q9BXP8 1791 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 UBE2CO00762 179 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 SFTPCP11686 197 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 CRYBB3P26998 211 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 FBXW9Q5XUX1 488 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 FAM57AQ8TBR7 257 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 DPH3Q96FX2 82 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 ZNF488Q96MN9 340 aa4.39□□□□□ -1.71
SMG1-211ENST00000565324 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 SHISA7A6NL88 538 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 CEACAM4O75871 244 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 HBDP02042 147 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 ZNF688P0C7X2 276 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 GOLT1AQ6ZVE7 132 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TRAV9-2A0A087WT02 112 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 CCL2P13500 99 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 LIFP15018 202 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 NPPCP23582 126 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 SRSF1Q07955 248 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMG1-211ENST00000565324 LOC285556D6RIA3 1793 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TRBV5-5A0A0J9YX44 114 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 EDIL3O43854 480 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 MORN3Q6PF18 240 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 C18orf15Q96N68 181 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 ZNF576Q9H609 170 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 MBD1Q9UIS9 605 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TMEM238C9JI98 176 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 NGFRP08138 427 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 EFNB1P98172 346 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 COX14Q96I36 57 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 RTN4RQ9BZR6 473 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TMEM106BQ9NUM4 274 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 NPIPB13A6NJU9 1138 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 MALP21145 153 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 FOXC2Q99958 501 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 PCNX2A6NKB5 2137 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 A0A1W2PP11 408 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 IZUMO1RA6ND01 250 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 DTX1Q86Y01 620 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 MRPS18BQ9Y676 258 aaKnown RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 ESDP10768 282 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 OTX1P32242 354 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 C1orf100Q5SVJ3 147 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 CITED2Q99967 270 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 FZR1Q9UM11 496 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 GRIFINA4D1Z8 144 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 IGHV3-13P01766 116 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 IGHV3-7P01780 117 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 APOHP02749 345 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 ADRA2AP08913 450 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 IFI6P09912 130 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 WDR82Q6UXN9 313 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 EEF1AKMT3Q96AZ1 226 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 MFRPQ9BY79 579 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 IGHV5-51A0A0C4DH38 117 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 A0A1B0GTL3 188 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TNFSF14O43557 240 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 MDKP21741 143 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 FAM74A4Q5TZK3 123 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 FGFRL1Q8N441 504 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 DLX4Q92988 240 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 CLEC7AQ9BXN2 247 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 FNDC4Q9H6D8 234 aaPredicted RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 NHP2Q9NX24 153 aaKnown RBP4.38□□□□□ -1.71
SMG1-211ENST00000565324 A0A1W2PR80 420 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 RASL11AQ6T310 242 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 WFDC3Q8IUB2 231 aa4.38□□□□□ -1.71
SMG1-211ENST00000565324 RCC1LQ96I51 464 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms