RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 CASTOR1Q8WTX7 329 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 TMEM56Q96MV1 263 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 OR2A7Q96R45 310 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 C16orf95Q9H693 158 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 ZNF430Q9H8G1 570 aaPredicted RBP12.27□□□□□ -0.45
CDH11-209ENST00000564317 BET1LQ9NYM9 111 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 KCNIP3Q9Y2W7 256 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 TMEM56-RWDD3S4R434 201 aa12.27□□□□□ -0.45
CDH11-209ENST00000564317 A0A0G2JRQ6 117 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 UPK2O00526 184 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 PTTG1O95997 202 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 IGHG2P01859 326 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
CDH11-209ENST00000564317 OR9G9P0C7N8 305 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 P0C879 139 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 ERVK-16P61578 105 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 CX3CL1P78423 397 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 IZUMO4Q1ZYL8 232 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 TMEM268Q5VZI3 342 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 LYG2Q86SG7 212 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 SEC22CQ9BRL7 303 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 C19orf24Q9BVV8 132 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 ALX4Q9H161 411 aaPredicted RBP12.26□□□□□ -0.45
CDH11-209ENST00000564317 SERTAD4Q9NUC0 356 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
CDH11-209ENST00000564317 ANXA3P12429 323 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 MYOD1P15172 320 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
CDH11-209ENST00000564317 GNB1P62873 340 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 C10orf55Q5SWW7 151 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 PLET1Q6UQ28 207 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 SLC35E3Q7Z769 313 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 ZNF695Q8IW36 515 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 VSTM2AQ8TAG5 236 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
CDH11-209ENST00000564317 IL22RA2Q969J5 263 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 AIFM2Q9BRQ8 373 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
CDH11-209ENST00000564317 TMEM89A2RUT3 159 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 INMT-MINDY4F8WBC2 141 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 ATP6V0E1O15342 81 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 EGR2P11161 476 aaPredicted RBP12.24□□□□□ -0.45
CDH11-209ENST00000564317 VDAC2P45880 294 aaPredicted RBP12.24□□□□□ -0.45
CDH11-209ENST00000564317 AKR1C2P52895 323 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 CADM3Q8N126 398 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 LGI3Q8N145 548 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 SLC35G3Q8N808 338 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 OR4F5Q8NH21 305 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 OR4A5Q8NH83 315 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 OR2T6Q8NHC8 308 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 NOL4LQ96MY1 436 aaPredicted RBP12.24□□□□□ -0.45
CDH11-209ENST00000564317 MARVELD1Q9BSK0 173 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 PARP11Q9NR21 331 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 LINC00527Q9UJ94 153 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 NSG2Q9Y328 171 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 ATRQ13535 2644 aa12.24□□□□□ -0.45
CDH11-209ENST00000564317 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 OR2B8PP59922 312 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 RPL8P62917 257 aaKnown RBP12.23□□□□□ -0.45
CDH11-209ENST00000564317 SRPXP78539 464 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 FXYD3Q14802 87 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 TNXAQ16473 311 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 RGS21Q2M5E4 152 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 ARSJQ5FYB0 599 aaPredicted RBP12.23□□□□□ -0.45
CDH11-209ENST00000564317 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 H2BFWTQ7Z2G1 175 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 LYZL2Q7Z4W2 148 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 MMD2Q8IY49 270 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 LRTM2Q8N967 370 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 GPR146Q96CH1 333 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
CDH11-209ENST00000564317 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
CDH11-209ENST00000564317 A0A0B4J2A0 478 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 A0A1B0GW64 132 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 CLPSL1A2RUU4 121 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 KCNAB3O43448 404 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 CREBL2O60519 120 aaPredicted RBP12.22□□□□□ -0.45
CDH11-209ENST00000564317 ATG12O94817 140 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 DUS4LO95620 317 aaKnown RBP12.22□□□□□ -0.45
CDH11-209ENST00000564317 IL5P05113 134 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 HLA-GP17693 338 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 COMPP49747 757 aaPredicted RBP12.22□□□□□ -0.45
CDH11-209ENST00000564317 Q6ZRM9 215 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
CDH11-209ENST00000564317 GRPEL2Q8TAA5 225 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 ZNF431Q8TF32 576 aaPredicted RBP12.22□□□□□ -0.45
CDH11-209ENST00000564317 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 SHPKQ9UHJ6 478 aa12.22□□□□□ -0.45
CDH11-209ENST00000564317 A0A0B4J293 547 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 CGB1A6NKQ9 187 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 E7EUB6 86 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 CNIH1O95406 144 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 OPN1MWP04001 364 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 IGF1P05019 195 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 OPN1MW2P0DN77 364 aa12.21□□□□□ -0.45
CDH11-209ENST00000564317 OPN1MW3P0DN78 364 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms