RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 DNAL1Q4LDG9 190 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 MEDAGQ5VYS4 303 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 TRAT1Q6PIZ9 186 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 GBGT1Q8N5D6 347 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 CCDC197Q8NCU1 140 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 GPR148Q8TDV2 347 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 NEK7Q8TDX7 302 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 FAM46BQ96A09 425 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 SPACA1Q9HBV2 294 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 AMBNQ9NP70 447 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 AP4S1Q9Y587 144 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 PEX16Q9Y5Y5 336 aa7.2□□□□□ -1.26
HDGFL3-204ENST00000563790 TRBV9A0A0B4J1U6 114 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 TMEM189A5PLL7 270 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 OR5H14A6NHG9 310 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 MAS1P04201 325 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 GLAP06280 429 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 CRYGBP07316 175 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 GALP22466 123 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 PJVKQ0ZLH3 352 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 CLINT1Q14677 625 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 ZNF880Q6PDB4 577 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 UNQ9165/PRO28630Q6UXU0 137 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 STX19Q8N4C7 294 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 ZNF485Q8NCK3 441 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 OR52I1Q8NGK6 324 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 RHOXF1Q8NHV9 184 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 APH1BQ8WW43 257 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 MRPS24Q96EL2 167 aaKnown RBP7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 CENPNQ96H22 339 aaPredicted RBP7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 BANF2Q9H503 90 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 PAK1IP1Q9NWT1 392 aaPredicted RBP7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 IMPAD1Q9NX62 359 aa7.19□□□□□ -1.26
HDGFL3-204ENST00000563790 UBE2QL1A1L167 161 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 SAC3D1A6NKF1 404 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 OGG1O15527 345 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 RBBP9O75884 186 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 NAPSAO96009 420 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 SPP1P10451 314 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 MGMTP16455 207 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 GBX2P52951 348 aaPredicted RBP7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 RIPK1Q13546 671 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 CCDC58Q4VC31 144 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 FAM222AQ5U5X8 452 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 RPL22L1Q6P5R6 122 aaKnown RBP7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 GLIPR1L1Q6UWM5 242 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 NFE4Q86UQ8 179 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 ZNF383Q8NA42 475 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 MUL1Q969V5 352 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 PGLYRP3Q96LB9 341 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 RNF5Q99942 180 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 SULT4A1Q9BR01 284 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 RAB9BQ9NP90 201 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 CLEC5AQ9NY25 188 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 METTL1Q9UBP6 276 aaKnown RBP7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 HSF4Q9ULV5 492 aa7.18□□□□□ -1.26
HDGFL3-204ENST00000563790 EI24O14681 340 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 ITGB1BP1O14713 200 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 PDCD6O75340 191 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 CD2P06729 351 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 CTSDP07339 412 aaPredicted RBP7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 ARL3P36405 182 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 ETV1P50549 477 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 OR2G6Q5TZ20 316 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 OR2AK2Q8NG84 335 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 SMIM19Q96E16 107 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 ABHD14BQ96IU4 210 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 FGF20Q9NP95 211 aaPredicted RBP7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 EXOSC1Q9Y3B2 195 aaKnown RBP7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 WASHC3Q9Y3C0 194 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 TNFRSF18Q9Y5U5 241 aa7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 PUS1Q9Y606 427 aaKnown RBP eCLIP7.17□□□□□ -1.26
HDGFL3-204ENST00000563790 H3BNX3 289 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 RAB29O14966 203 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 WBP4O75554 376 aaKnown RBP7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 SPDEFO95238 335 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 BAG2O95816 211 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 IGLV2-8P01709 118 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 FCGR1AP12314 374 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 GNRHRP30968 328 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 MC5RP33032 325 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 EMP1P54849 157 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 PPP3R1P63098 170 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 GPR176Q14439 515 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 SMN1Q16637 294 aaKnown RBP7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 ZIK1Q3SY52 487 aaPredicted RBP7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 STHQ8IWL8 128 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 DRAXINQ8NBI3 349 aaPredicted RBP7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 GALMQ96C23 342 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 MRPL48Q96GC5 212 aaKnown RBP7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 C5orf30Q96GV9 206 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 SELENOIQ9C0D9 397 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 PIPOXQ9P0Z9 390 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 CACNG5Q9UF02 275 aa7.16□□□□□ -1.26
HDGFL3-204ENST00000563790 IGKV1-6A0A0C4DH72 117 aa7.15□□□□□ -1.26
HDGFL3-204ENST00000563790 C15orf32Q32M92 178 aa7.15□□□□□ -1.26
HDGFL3-204ENST00000563790 Q499Y3 187 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms