RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SPDEFO95238 335 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-205ENST00000562310 SAA1P0DJI8 122 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-205ENST00000562310 SPCS3P61009 180 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 UBE2KP61086 200 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 BAXQ07812 192 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 VKORC1L1Q8N0U8 176 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 SMIM8Q96KF7 97 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 REG4Q9BYZ8 158 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 RBKSQ9H477 322 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 TMEM14BQ9NUH8 114 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 NUP50Q9UKX7 468 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 ZNF257Q9Y2Q1 563 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 AUP1Q9Y679 476 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 WNK2Q9Y3S1 2297 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 FBN2P35556 2912 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 MSGN1A6NI15 193 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 RGS13O14921 159 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 TIMM23O14925 209 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 NPFFO15130 113 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 KBTBD11O94819 623 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 SCAF4O95104 1147 aaKnown RBP11.52□□□□□ -0.57
COMMD4-205ENST00000562310 NXPH3O95157 252 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 CAV2P51636 162 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 OR2B8PP59922 312 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 UBA52P62987 128 aaKnown RBP11.52□□□□□ -0.57
COMMD4-205ENST00000562310 SLC51BQ86UW2 128 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 TMEM167AQ8TBQ9 72 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 MALSU1Q96EH3 234 aa11.52□□□□□ -0.57
COMMD4-205ENST00000562310 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
COMMD4-205ENST00000562310 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
COMMD4-205ENST00000562310 CEBPZOSA8MTT3 80 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 RNF223E7ERA6 249 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 VENTXO95231 258 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 IFNA17P01571 189 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
COMMD4-205ENST00000562310 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 LHFPL4Q7Z7J7 247 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 STX12Q86Y82 276 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 KRTAP1-3Q8IUG1 177 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 PDZD9Q8IXQ8 264 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 TEX45Q8NA69 505 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 CFHR4Q92496 578 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 Q96MF0 132 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 HIF1ANQ9NWT6 349 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 ITGB1BP2Q9UKP3 347 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 HILPDAQ9Y5L2 63 aa11.51□□□□□ -0.57
COMMD4-205ENST00000562310 CR1P17927 2039 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 IAPPP10997 89 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 SAA4P35542 130 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 PAX9P55771 341 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
COMMD4-205ENST00000562310 RPL8P62917 257 aaKnown RBP11.5□□□□□ -0.57
COMMD4-205ENST00000562310 IFITM2Q01629 132 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 EWSR1Q01844 656 aaKnown RBP eCLIP11.5□□□□□ -0.57
COMMD4-205ENST00000562310 SSX2Q16385 188 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 ZNF767PQ75MW2 155 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 TMEM252Q8N6L7 170 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 OR5B3Q8NH48 314 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 FOXC2Q99958 501 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 C7orf69Q9H7B7 122 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 PSENENQ9NZ42 101 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.5□□□□□ -0.574e-11■■■■□ 22.8
COMMD4-205ENST00000562310 CRYBG3Q68DQ2 2970 aa11.5□□□□□ -0.57
COMMD4-205ENST00000562310 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 TRAV3A0A0B4J244 114 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 IGSF23A1L1A6 192 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 FAM24AA6NFZ4 105 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 KCNAB3O43448 404 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 TMEM50AO95807 157 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 MOSP00540 346 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 IFNA7P01567 189 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 BRS3P32247 399 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 MAS1LP35410 378 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 HOXA1P49639 335 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-205ENST00000562310 RPP30P78346 268 aaKnown RBP11.49□□□□□ -0.57
COMMD4-205ENST00000562310 OR8H1Q8NGG4 311 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 STOML3Q8TAV4 291 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 ZNF471Q9BX82 626 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-205ENST00000562310 HIPK2Q9H2X6 1198 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 ENY2Q9NPA8 101 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 FBXL17Q9UF56 701 aa11.49□□□□□ -0.57
COMMD4-205ENST00000562310 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-205ENST00000562310 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
COMMD4-205ENST00000562310 SLC25A17O43808 307 aa11.48□□□□□ -0.57
COMMD4-205ENST00000562310 SULT1A1P50225 295 aa11.48□□□□□ -0.57
COMMD4-205ENST00000562310 PRCDQ00LT1 54 aa11.48□□□□□ -0.57
COMMD4-205ENST00000562310 PSG5Q15238 335 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms