RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 NSG2Q9Y328 171 aa3.89□□□□□ -1.79
UBR1-203ENST00000562173 SAMHD1Q9Y3Z3 626 aaKnown RBP3.89□□□□□ -1.79
UBR1-203ENST00000562173 AMMECR1Q9Y4X0 333 aaPredicted RBP3.89□□□□□ -1.79
UBR1-203ENST00000562173 IGHV3OR16-8A0A075B7F1 116 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 IGHV3-35A0A0C4DH35 117 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 A0A1W2PQL4 384 aaPredicted RBP3.88□□□□□ -1.79
UBR1-203ENST00000562173 GEMIN2O14893 280 aaKnown RBP3.88□□□□□ -1.79
UBR1-203ENST00000562173 NDUFA3O95167 84 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 CNIH1O95406 144 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 CSN2P05814 226 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 SAA2P0DJI9 122 aaPredicted RBP3.88□□□□□ -1.79
UBR1-203ENST00000562173 FASP25445 335 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 POLR2IP36954 125 aaKnown RBP3.88□□□□□ -1.79
UBR1-203ENST00000562173 ARHGDIBP52566 201 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 ATP1B3P54709 279 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 ERVK-16P61578 105 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 CDK5Q00535 292 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 DHODHQ02127 395 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 GAMTQ14353 236 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 SNCBQ16143 134 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 DEFB114Q30KQ6 69 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 ZNF829Q3KNS6 432 aaPredicted RBP3.88□□□□□ -1.79
UBR1-203ENST00000562173 ACTBL2Q562R1 376 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 SPIN3Q5JUX0 258 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 C10orf55Q5SWW7 151 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 OR13C5Q8NGS8 318 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 KCNG3Q8TAE7 436 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 HAVCR2Q8TDQ0 301 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 FAM46BQ96A09 425 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 TMEM106AQ96A25 262 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 ABHD14BQ96IU4 210 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 NSMCE2Q96MF7 247 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 OPALINQ96PE5 141 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 NEDD4LQ96PU5 975 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 MROQ9BYG7 248 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 YIPF3Q9GZM5 350 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 C5orf66Q9H5L9 145 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 LINC00574Q9H8X3 128 aa3.88□□□□□ -1.79
UBR1-203ENST00000562173 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.88□□□□□ -1.79
UBR1-203ENST00000562173 SAMD4AQ9UPU9 718 aaKnown RBP3.88□□□□□ -1.79
UBR1-203ENST00000562173 IGLL5B9A064 214 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 CLN5O75503 358 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 HBZP02008 142 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 CT45A6P0DMU7 189 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 CT45A5P0DMU8 189 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 CT45A7P0DMV0 189 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 RBP2P50120 134 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 HAMPP81172 84 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 RAB40BQ12829 278 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 AARDQ4LEZ3 155 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 XAF1Q6GPH4 301 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 OR2T5Q6IEZ7 315 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 CROCCP3Q8IVE0 287 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 APRG1Q8IVJ8 170 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 LINC00311Q8N616 119 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 OR2T29Q8NH02 315 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 GIPC3Q8TF64 312 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 ANP32BQ92688 251 aaKnown RBP3.87□□□□□ -1.79
UBR1-203ENST00000562173 CNN2Q99439 309 aaKnown RBP3.87□□□□□ -1.79
UBR1-203ENST00000562173 GGTLC1Q9BX51 225 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 IFI27L2Q9H2X8 130 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 FNDC4Q9H6D8 234 aaPredicted RBP3.87□□□□□ -1.79
UBR1-203ENST00000562173 GORASP2Q9H8Y8 452 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 GPN1Q9HCN4 374 aaPredicted RBP3.87□□□□□ -1.79
UBR1-203ENST00000562173 TAS2R4Q9NYW5 299 aa3.87□□□□□ -1.79
UBR1-203ENST00000562173 DMBT1Q9UGM3 2413 aaPredicted RBP3.86□□□□□ -1.79
UBR1-203ENST00000562173 C2orf70A6NJV1 201 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 CYB5AP00167 134 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 NPPAP01160 153 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 MT-ND2P03891 347 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 MT-ND4P03905 459 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 IGKV1-16P04430 117 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 FOLR2P14207 255 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 SERPINA2P20848 420 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 IFNGR2P38484 337 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 DAPP51397 102 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 CDC42P60953 191 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 PSG5Q15238 335 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 MAPRE2Q15555 327 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 MORN2Q502X0 79 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 ATAD3CQ5T2N8 411 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 SYT6Q5T7P8 510 aaPredicted RBP3.86□□□□□ -1.79
UBR1-203ENST00000562173 AADACL4Q5VUY2 407 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 ZNF691Q5VV52 312 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 METTL21CQ5VZV1 264 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 LCN12Q6JVE5 192 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 RPL13AP3Q6NVV1 102 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 UNQ9165/PRO28630Q6UXU0 137 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 ENTHD1Q8IYW4 607 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 Q8N377 158 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 Q8N402 240 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 NPBQ8NG41 125 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 OR10H4Q8NGA5 316 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 OR2G2Q8NGZ5 317 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 OR5B3Q8NH48 314 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 C11orf45Q8TAV5 145 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 C11orf52Q96A22 123 aa3.86□□□□□ -1.79
UBR1-203ENST00000562173 MCUR1Q96AQ8 359 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms