RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TRPC5OSA6NMA1 111 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 HCRTO43612 131 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 HAAOP46952 286 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 RPL30P62888 115 aaKnown RBP0.82□□□□□ -2.28
USP8-218ENST00000561330 SDHAF4Q5VUM1 108 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 UMODL1-AS1Q8N2C9 162 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 ACOT12Q8WYK0 555 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 HRASLSQ9HDD0 168 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 FBN2P35556 2912 aa0.82□□□□□ -2.28
USP8-218ENST00000561330 DICER1Q9UPY3 1922 aaKnown RBP0.81□□□□□ -2.28
USP8-218ENST00000561330 NPPAP01160 153 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 MSMBP08118 114 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 CCL5P13501 91 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 HIST1H1CP16403 213 aaKnown RBP0.81□□□□□ -2.28
USP8-218ENST00000561330 FAM27BQ5VT28 67 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 SBSNQ6UWP8 590 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 FAM19A5Q7Z5A7 132 aaPredicted RBP0.81□□□□□ -2.28
USP8-218ENST00000561330 CD302Q8IX05 232 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 UBL4BQ8N7F7 174 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 OR2T27Q8NH04 317 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 HAVCR2Q8TDQ0 301 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 DHRS9Q9BPW9 319 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 PRELID1Q9Y255 219 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 TECTAO75443 2155 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 INTS1Q8N201 2190 aaKnown RBP0.81□□□□□ -2.28
USP8-218ENST00000561330 DLG5Q8TDM6 1919 aa0.81□□□□□ -2.28
USP8-218ENST00000561330 BRWD1Q9NSI6 2320 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 TINCRA0A1B0GVN0 87 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 ERICH2A1L162 156 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 IQCF5A8MTL0 148 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 IBA57-AS1B1ANH7 110 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 HSBP1L1C9JCN9 74 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 NDUFS6O75380 124 aaKnown RBP0.8□□□□□ -2.28
USP8-218ENST00000561330 DDTP30046 118 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 CXCR4P61073 352 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 TBC1D19Q8N5T2 526 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 REG4Q9BYZ8 158 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 NDEL1Q9GZM8 345 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 DERL2Q9GZP9 239 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 SPACA1Q9HBV2 294 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 SPANXB1Q9NS25 103 aaPredicted RBP0.8□□□□□ -2.28
USP8-218ENST00000561330 TIMM22Q9Y584 194 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
USP8-218ENST00000561330 GOLGA6L10A6NI86 522 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 TRAPPC2LH3BP13 241 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 SDCBPO00560 298 aaPredicted RBP0.79□□□□□ -2.28
USP8-218ENST00000561330 HPGDSO60760 199 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 NSA2O95478 260 aaKnown RBP0.79□□□□□ -2.28
USP8-218ENST00000561330 NDUFA5Q16718 116 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 C10orf55Q5SWW7 151 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 ZNF676Q8N7Q3 588 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 OR8B3Q8NGG8 313 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 EEF1AKMT1Q8WVE0 214 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 DCUN1D5Q9BTE7 237 aa0.79□□□□□ -2.28
USP8-218ENST00000561330 CHMP4BQ9H444 224 aaKnown RBP0.79□□□□□ -2.28
USP8-218ENST00000561330 ZNF469Q96JG9 3925 aaPredicted RBP0.79□□□□□ -2.28
USP8-218ENST00000561330 PTPRBP23467 1997 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 GEMIN2O14893 280 aaKnown RBP0.78□□□□□ -2.28
USP8-218ENST00000561330 UBBP0CG47 229 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 SSX8Q7RTT4 187 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 SLC22A24Q8N4F4 322 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 SGMS2Q8NHU3 365 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 JOSD2Q8TAC2 188 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 BBS2Q9BXC9 721 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 CXorf21Q9HAI6 301 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 GPR84Q9NQS5 396 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 ANAPC10Q9UM13 185 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 GMEB1Q9Y692 573 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 LHFPL6Q9Y693 200 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 TONSLQ96HA7 1378 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 CACNA1BQ00975 2339 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 SETD5Q9C0A6 1442 aa0.78□□□□□ -2.28
USP8-218ENST00000561330 SMARCA4P51532 1647 aa0.78□□□□□ -2.29
USP8-218ENST00000561330 TRBV10-2A0A0K0K1G8 114 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 LEPROTO15243 131 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 UGT2B7P16662 529 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 CSN1S1P47710 185 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 RAB13P51153 203 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 FAM78BQ5VT40 261 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 C5orf46Q6UWT4 87 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.77□□□□□ -2.29
USP8-218ENST00000561330 DHFR2Q86XF0 187 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 OR7G1Q8NGA0 311 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 WDR54Q9H977 334 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 AK3Q9UIJ7 227 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 COQ4Q9Y3A0 265 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 MYH11P35749 1972 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 POLEQ07864 2286 aa0.77□□□□□ -2.29
USP8-218ENST00000561330 ITGB1BP1O14713 200 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 BIRC5O15392 142 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 SULT1A3P0DMM9 295 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 SULT1A4P0DMN0 295 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 CDC34P49427 236 aaPredicted RBP0.76□□□□□ -2.29
USP8-218ENST00000561330 FUNDC1Q8IVP5 155 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 FAM19A2Q8N3H0 131 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 SMIM19Q96E16 107 aa0.76□□□□□ -2.29
USP8-218ENST00000561330 SIPA1L1O43166 1804 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 KIF24Q5T7B8 1368 aa0.75□□□□□ -2.29
USP8-218ENST00000561330 IGHV1-69-2A0A0G2JMI3 117 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms