RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PROK1P58294 105 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 LINC00205P59089 165 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 RPL30P62888 115 aaKnown RBP8.49□□□□□ -1.05
TPM1-229ENST00000561242 PRSS8Q16651 343 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 C4orf46Q504U0 113 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 FOXB2Q5VYV0 432 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 HSD17B13Q7Z5P4 300 aaPredicted RBP8.49□□□□□ -1.05
TPM1-229ENST00000561242 ZNF329Q86UD4 541 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 NDUFA11Q86Y39 141 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 LGI3Q8N145 548 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 OR4D10Q8NGI6 311 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 COQ8AQ8NI60 647 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 DPF1Q92782 380 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 TAF15Q92804 592 aaKnown RBP eCLIP8.49□□□□□ -1.05
TPM1-229ENST00000561242 NAA60Q9H7X0 242 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 PLSCR3Q9NRY6 295 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 FOXA2Q9Y261 457 aaPredicted RBP8.49□□□□□ -1.05
TPM1-229ENST00000561242 SONP18583 2426 aaKnown RBP8.48□□□□□ -1.05
TPM1-229ENST00000561242 MARCH11A6NNE9 402 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 ATP6V0E1O15342 81 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 PROP1O75360 226 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 SCGB2A1O75556 95 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 S1PR2O95136 353 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 G6PCP35575 357 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 SUB1P53999 127 aaKnown RBP eCLIP8.48□□□□□ -1.05
TPM1-229ENST00000561242 ERHP84090 104 aaKnown RBP8.48□□□□□ -1.05
TPM1-229ENST00000561242 FOXE3Q13461 319 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 KLF9Q13886 244 aaPredicted RBP8.48□□□□□ -1.05
TPM1-229ENST00000561242 ZNF79Q15937 498 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 TATDN3Q17R31 274 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 AKIRIN2Q53H80 203 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 FAM219AQ8IW50 185 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 VKORC1L1Q8N0U8 176 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 LFNGQ8NES3 379 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 OR1L8Q8NGR8 309 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 DDB2Q92466 427 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 RITA1Q96K30 269 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 NOL4LQ96MY1 436 aaPredicted RBP8.48□□□□□ -1.05
TPM1-229ENST00000561242 GPHA2Q96T91 129 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 SLA2Q9H6Q3 261 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 TMEM140Q9NV12 185 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 GPR132Q9UNW8 380 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
TPM1-229ENST00000561242 IGHV7-81A0A0B4J1V7 117 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 LYRM1O43325 122 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 RAMP3O60896 148 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 IGF1P05019 195 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 TRAPPC2P0DI81 140 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 TRAPPC2BP0DI82 140 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 SLC6A1P30531 599 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 SNCAP37840 140 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 TPPP2P59282 170 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 BAK1Q16611 211 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 TMEM95Q3KNT9 176 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 SP6Q3SY56 376 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 OR4A47Q6IF82 309 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 LHFPL1Q86WI0 220 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 OR5T1Q8NG75 326 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 TMEM167AQ8TBQ9 72 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 CASTOR1Q8WTX7 329 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
TPM1-229ENST00000561242 HSPB9Q9BQS6 159 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 GPN1Q9HCN4 374 aaPredicted RBP8.47□□□□□ -1.05
TPM1-229ENST00000561242 SERTAD4Q9NUC0 356 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 OR51B2Q9Y5P1 312 aa8.47□□□□□ -1.05
TPM1-229ENST00000561242 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
TPM1-229ENST00000561242 CRYM-AS1A6NIL9 109 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 H3BUA1 57 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 UPK2O00526 184 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 FCN1O00602 326 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 TRGV3P03979 118 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 AMY1AP04745 511 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 FGF2P09038 288 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 OR5AC1P0C628 307 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 CD28P10747 220 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 HIST1H1BP16401 226 aaKnown RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 UBE2MP61081 183 aaKnown RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 FAM209BQ5JX69 171 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 TMEM268Q5VZI3 342 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 NOXA1Q86UR1 476 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 OR5B3Q8NH48 314 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 RBPMSQ93062 196 aaKnown RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 MRGPRFQ96AM1 343 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 MS4A10Q96PG2 267 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 FAM103A1Q9BTL3 118 aaKnown RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 QTRT1Q9BXR0 403 aaKnown RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 HIPK2Q9H2X6 1198 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 ZNF430Q9H8G1 570 aaPredicted RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.46□□□□□ -1.06
TPM1-229ENST00000561242 VSIG4Q9Y279 399 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 TLN2Q9Y4G6 2542 aa8.46□□□□□ -1.06
TPM1-229ENST00000561242 SRRM4A7MD48 611 aaKnown RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 WRBO00258 174 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms