RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 IFNA6P05013 189 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 CTXN2P0C2S0 81 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 RPL27AP46776 148 aaKnown RBP20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 GABARAPL2P60520 117 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 MXD1Q05195 221 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 CNIH2Q6PI25 160 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 DEFB125Q8N687 156 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 CACNG8Q8WXS5 425 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 ANXA10Q9UJ72 324 aa20.45■□□□□ 0.86
SNRPA1-215ENST00000561187 A0A1B0GW64 132 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 TPPPO94811 219 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 OR2C1O95371 312 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 REG1AP05451 166 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 IL6RP08887 468 aaPredicted RBP20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 AREGP15514 252 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 GALP22466 123 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 MECP2P51608 486 aaKnown RBP20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 UBE2UQ5VVX9 321 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 SFXN4Q6P4A7 337 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 OR2A7Q96R45 310 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 DCSTAMPQ9H295 470 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 RAB26Q9ULW5 256 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 ZNF257Q9Y2Q1 563 aa20.44■□□□□ 0.86
SNRPA1-215ENST00000561187 C2orf70A6NJV1 201 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 AIREO43918 545 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 CLEC2LP0C7M8 214 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 SLC25A42Q86VD7 318 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 SPARTQ8N0X7 666 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 OR2K2Q8NGT1 345 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 SECTM1Q8WVN6 248 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 WDR89Q96FK6 387 aaPredicted RBP20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 HSD17B10Q99714 261 aaKnown RBP20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 RNF167Q9H6Y7 350 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 RHBDL2Q9NX52 303 aa20.43■□□□□ 0.86
SNRPA1-215ENST00000561187 NDUFB8O95169 186 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 FOLR2P14207 255 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 BRWD1-AS2P59051 145 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 ARPC4P59998 168 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 EIF4EBP1Q13541 118 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 CLEC19AQ6UXS0 136 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 MFSD4AQ8N468 514 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 GVQW1Q8N7I0 195 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 CCDC140Q96MF4 163 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 SRD5A3Q9H8P0 318 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 ZC4H2Q9NQZ6 224 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 SLC2A8Q9NY64 477 aa20.42■□□□□ 0.86
SNRPA1-215ENST00000561187 HYDINQ4G0P3 5121 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 ZNF785A8K8V0 405 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 SLC22A5O76082 557 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 FGF9P31371 208 aaPredicted RBP20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 DEFB114Q30KQ6 69 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 PUSL1Q8N0Z8 303 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 OR5H6Q8NGV6 325 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 VSTM2AQ8TAG5 236 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 TMEM167AQ8TBQ9 72 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 KCTD12Q96CX2 325 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 HIPK2Q9H2X6 1198 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 CCL28Q9NRJ3 127 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 SSR3Q9UNL2 185 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 DMRT1Q9Y5R6 373 aa20.41■□□□□ 0.86
SNRPA1-215ENST00000561187 GGCTO75223 188 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-215ENST00000561187 SDC2P34741 201 aa20.4■□□□□ 0.86
SNRPA1-215ENST00000561187 ARL3P36405 182 aa20.4■□□□□ 0.86
SNRPA1-215ENST00000561187 TRAV18A0A075B6X5 111 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 RBMY1BA6NDE4 496 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 RBMY1EA6NEQ0 496 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 NPIPB5A8MRT5 1133 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 SCGNO76038 276 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 RBMY1DP0C7P1 496 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 FCGR2CP31995 323 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 BEST4Q8NFU0 473 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 OR13F1Q8NGS4 319 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 SLC25A38Q96DW6 304 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 FANCD2OSQ96PS1 177 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 SLC2A9Q9NRM0 540 aa20.39■□□□□ 0.85
SNRPA1-215ENST00000561187 LOC100506127A0A0U1RQW1 187 aa20.38■□□□□ 0.85
SNRPA1-215ENST00000561187 ZNF320A2RRD8 509 aa20.38■□□□□ 0.85
SNRPA1-215ENST00000561187 ZNF735P0CB33 412 aa20.38■□□□□ 0.85
SNRPA1-215ENST00000561187 FXYD4P59646 89 aa20.38■□□□□ 0.85
SNRPA1-215ENST00000561187 TPRA1Q86W33 373 aa20.38■□□□□ 0.85
SNRPA1-215ENST00000561187 HRASLSQ9HDD0 168 aa20.38■□□□□ 0.85
SNRPA1-215ENST00000561187 OR11H12B2RN74 326 aa20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 PSMB6P28072 239 aa20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 RPL8P62917 257 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 IDNKQ5T6J7 187 aa20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 LINC00322Q6ZN03 302 aaPredicted RBP20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 ZNF66Q6ZN08 573 aa20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 BIRC6Q9NR09 4857 aa20.37■□□□□ 0.85
SNRPA1-215ENST00000561187 MFSD2BA6NFX1 497 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 SULT1C2O00338 296 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 MRPS14O60783 128 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 HRASP01112 189 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 DEFA4P12838 97 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 KIR2DS2P43631 304 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 TIMM50Q3ZCQ8 353 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 OR4A47Q6IF82 309 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 LAX1Q8IWV1 398 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 SPAG16Q8N0X2 631 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 FCGR1BQ92637 280 aa20.36■□□□□ 0.85
SNRPA1-215ENST00000561187 MEIS3P1A6NDR6 274 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms