RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 S100GP29377 79 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 TAS2R31P59538 309 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 TAS2R46P59540 309 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 RPL8P62917 257 aaKnown RBP10.78□□□□□ -0.68
TPM1-223ENST00000560445 UBE2NLQ5JXB2 153 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 THOC7Q6I9Y2 204 aaKnown RBP10.78□□□□□ -0.68
TPM1-223ENST00000560445 OR5AP2Q8NGF4 316 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 OR5H6Q8NGV6 325 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 SLC25A38Q96DW6 304 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 RCHY1Q96PM5 261 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 ASCL2Q99929 193 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
TPM1-223ENST00000560445 AKIP1Q9NQ31 210 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 SLC2A9Q9NRM0 540 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 BET1LQ9NYM9 111 aa10.78□□□□□ -0.68
TPM1-223ENST00000560445 XRCC3O43542 346 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 APELAP0DMC3 54 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 NQO2P16083 231 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 ERVK-16P61578 105 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 C15orf32Q32M92 178 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 TMEM69Q5SWH9 247 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 HSD17B13Q7Z5P4 300 aaPredicted RBP10.77□□□□□ -0.69
TPM1-223ENST00000560445 SPAG16Q8N0X2 631 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 PUSL1Q8N0Z8 303 aaKnown RBP10.77□□□□□ -0.69
TPM1-223ENST00000560445 DYNLRB2Q8TF09 96 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 GIMAP1Q8WWP7 306 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 FYTTD1Q96QD9 318 aaKnown RBP10.77□□□□□ -0.69
TPM1-223ENST00000560445 SLC5A7Q9GZV3 580 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 HRASLSQ9HDD0 168 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 THYN1Q9P016 225 aa10.77□□□□□ -0.69
TPM1-223ENST00000560445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
TPM1-223ENST00000560445 GGCTO75223 188 aaKnown RBP10.76□□□□□ -0.69
TPM1-223ENST00000560445 HPRT1P00492 218 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 DEFA4P12838 97 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 HLA-GP17693 338 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 LSM3P62310 102 aaKnown RBP10.76□□□□□ -0.69
TPM1-223ENST00000560445 RPL30P62888 115 aaKnown RBP10.76□□□□□ -0.69
TPM1-223ENST00000560445 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 CMTM1Q8IZ96 169 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 EEF1AKMT3Q96AZ1 226 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 CXorf58Q96LI9 332 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 COMMD5Q9GZQ3 224 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 PLEKHA2Q9HB19 425 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 TECRQ9NZ01 308 aaKnown RBP10.76□□□□□ -0.69
TPM1-223ENST00000560445 COMMD9Q9P000 198 aa10.76□□□□□ -0.69
TPM1-223ENST00000560445 SMIM31A0A1B0GVY4 71 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 TRIM64CA6NLI5 447 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 ZNF735P0CB33 412 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 IGHV4-30-4P0DP06 118 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 RPS19P39019 145 aaKnown RBP10.75□□□□□ -0.69
TPM1-223ENST00000560445 FXYD4P59646 89 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 EIF4EBP1Q13541 118 aaPredicted RBP10.75□□□□□ -0.69
TPM1-223ENST00000560445 AADACL3Q5VUY0 350 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 OR4A47Q6IF82 309 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 SBSPONQ8IVN8 264 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 VKORC1L1Q8N0U8 176 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 GVQW1Q8N7I0 195 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 SAMD12Q8N8I0 201 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 YIPF6Q96EC8 236 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 TUBA4BQ9H853 241 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 SLC2A8Q9NY64 477 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 FBXL7Q9UJT9 491 aa10.75□□□□□ -0.69
TPM1-223ENST00000560445 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 TEX22C9J3V5 150 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 OR2J3O76001 311 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 IFNA6P05013 189 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 CRYGCP07315 174 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 CSN3P07498 182 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 PSMB6P28072 239 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 POU2AF1Q16633 256 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 FAM106AQ4KMX7 169 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 LPCAT3Q6P1A2 487 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 TMEM17Q86X19 198 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 DMBX1Q8NFW5 382 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 OR5H2Q8NGV7 314 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 MUC7Q8TAX7 377 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 CMTM3Q96MX0 182 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 PALMDQ9NP74 551 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 CCL28Q9NRJ3 127 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 EHFQ9NZC4 300 aa10.74□□□□□ -0.69
TPM1-223ENST00000560445 LGALS9O00182 355 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 BMPR1BO00238 502 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 TNFSF12O43508 249 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 TPPPO94811 219 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 PRSS3P35030 304 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 ARL3P36405 182 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 ZNF45Q02386 682 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 SSX9Q7RTT3 188 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 SLC25A46Q96AG3 418 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 ISOC1Q96CN7 298 aa10.73□□□□□ -0.69
TPM1-223ENST00000560445 DNAH9Q9NYC9 4486 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 HMX3A6NHT5 357 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 SULT1C2O00338 296 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 PRH1P02810 166 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 TAS2R20P59543 309 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 DEFA5Q01523 94 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms