RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 SLC6A1P30531 599 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 BTCP35070 178 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 RAB25P57735 213 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 PROK1P58294 105 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 BRWD1-AS2P59051 145 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 RPL8P62917 257 aaKnown RBP7.97□□□□□ -1.13
USP3-216ENST00000559873 CX3CL1P78423 397 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 TNXAQ16473 311 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 PRSS8Q16651 343 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 TMEM95Q3KNT9 176 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 OR4A47Q6IF82 309 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 PUSL1Q8N0Z8 303 aaKnown RBP7.97□□□□□ -1.13
USP3-216ENST00000559873 CADM3Q8N126 398 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 STPG2Q8N412 459 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 WFDC12Q8WWY7 111 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 IL22RA2Q969J5 263 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 RRNAD1Q96FB5 475 aaKnown RBP7.97□□□□□ -1.13
USP3-216ENST00000559873 TMEM68Q96MH6 324 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 TP53RKQ96S44 253 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 CLCC1Q96S66 551 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 HSPB9Q9BQS6 159 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 COMMD5Q9GZQ3 224 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 C20orf85Q9H1P6 137 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 SERTAD4Q9NUC0 356 aa7.97□□□□□ -1.13
USP3-216ENST00000559873 TRAV41A0A0B4J266 112 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 ARPC1BO15143 372 aaKnown RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 ATP6V0E1O15342 81 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 KRASP01116 189 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 CRYGBP07316 175 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 FXYD3Q14802 87 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 ECSCRQ19T08 205 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 ZNF585BQ52M93 769 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 THOC7Q6I9Y2 204 aaKnown RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 H2BFWTQ7Z2G1 175 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 CENPVQ7Z7K6 275 aaPredicted RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 SLC25A42Q86VD7 318 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 ZNF695Q8IW36 515 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 FAM219AQ8IW50 185 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 MRPL41Q8IXM3 137 aaKnown RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 VKORC1L1Q8N0U8 176 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 ADAD2Q8NCV1 583 aaKnown RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 SGMS2Q8NHU3 365 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 GRPEL2Q8TAA5 225 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 TAF15Q92804 592 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP3-216ENST00000559873 RBPMSQ93062 196 aaKnown RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 TMEM230Q96A57 120 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 RBMXL1Q96E39 390 aaKnown RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 PHB2Q99623 299 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 SPIN2AQ99865 258 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 SPIN2BQ9BPZ2 258 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 WNT10AQ9GZT5 417 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 ZNF430Q9H8G1 570 aaPredicted RBP7.96□□□□□ -1.14
USP3-216ENST00000559873 TPSG1Q9NRR2 321 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 FKBP11Q9NYL4 201 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 PRNDQ9UKY0 176 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 TBC1D24Q9ULP9 559 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 NUBP2Q9Y5Y2 271 aa7.96□□□□□ -1.14
USP3-216ENST00000559873 DUXBA0A1W2PPF3 345 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 UPK2O00526 184 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 RBMXL2O75526 392 aaKnown RBP7.95□□□□□ -1.14
USP3-216ENST00000559873 CDS2O95674 445 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 HLA-AP01891 365 aaKnown RBP7.95□□□□□ -1.14
USP3-216ENST00000559873 TCRBP04435 133 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 HLA-GP17693 338 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 G6PCP35575 357 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 RPL27AP46776 148 aaKnown RBP7.95□□□□□ -1.14
USP3-216ENST00000559873 CRIP2P52943 208 aaPredicted RBP7.95□□□□□ -1.14
USP3-216ENST00000559873 SP6Q3SY56 376 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 C4orf46Q504U0 113 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 TMEM268Q5VZI3 342 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 TEX38Q6PEX7 206 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 SHISA2Q6UWI4 295 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 Q6ZS46 218 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 HSD17B13Q7Z5P4 300 aaPredicted RBP7.95□□□□□ -1.14
USP3-216ENST00000559873 LGI3Q8N145 548 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 OR4A16Q8NH70 328 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 SPATA3Q8NHX4 192 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 SRSF12Q8WXF0 261 aaKnown RBP7.95□□□□□ -1.14
USP3-216ENST00000559873 SEC22AQ96IW7 307 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 TMEM56Q96MV1 263 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 MDFIQ99750 246 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 PDCD10Q9BUL8 212 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 NUDT15Q9NV35 164 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 CACFD1Q9UGQ2 172 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 TMEM56-RWDD3S4R434 201 aa7.95□□□□□ -1.14
USP3-216ENST00000559873 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 C15orf61A6NNL5 157 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 FCN1O00602 326 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 FBXO24O75426 580 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 SFT2D2O95562 160 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 OPN1MWP04001 364 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 OR4E1P0C645 316 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 OPN1MW2P0DN77 364 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 OPN1MW3P0DN78 364 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 NDPQ00604 133 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 PPP1R1AQ13522 171 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 TMEM187Q14656 261 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 AKIRIN2Q53H80 203 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 UNQ5815/PRO19632Q6UWF5 114 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 OR5AU1Q8NGC0 362 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms