RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ARG1P05089 322 aa10.28□□□□□ -0.76
USP3-213ENST00000559711 PNKDQ8N490 385 aa10.28□□□□□ -0.76
USP3-213ENST00000559711 EIF4E3Q8N5X7 224 aaKnown RBP10.28□□□□□ -0.76
USP3-213ENST00000559711 HSD17B11Q8NBQ5 300 aa10.28□□□□□ -0.76
USP3-213ENST00000559711 RBMXL1Q96E39 390 aaKnown RBP10.28□□□□□ -0.76
USP3-213ENST00000559711 HARBI1Q96MB7 349 aa10.28□□□□□ -0.76
USP3-213ENST00000559711 TSNAXQ99598 290 aaKnown RBP10.28□□□□□ -0.76
USP3-213ENST00000559711 ZNF257Q9Y2Q1 563 aa10.28□□□□□ -0.76
USP3-213ENST00000559711 LRRK2Q5S007 2527 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 ENSAO43768 121 aaKnown RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 KBTBD11O94819 623 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 SAA1P0DJI8 122 aaPredicted RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 COX7A1P24310 79 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 ATP6V0CP27449 155 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 AANATQ16613 207 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 SPINK9Q5DT21 86 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 SP5Q6BEB4 398 aaPredicted RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 HSD17B13Q7Z5P4 300 aaPredicted RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 CLDND2Q8NHS1 167 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 GNPNAT1Q96EK6 184 aaPredicted RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 PARD6GQ9BYG4 376 aaPredicted RBP10.27□□□□□ -0.77
USP3-213ENST00000559711 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 NUP50Q9UKX7 468 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 KPTNQ9Y664 436 aa10.27□□□□□ -0.77
USP3-213ENST00000559711 IGHV1-3A0A0C4DH29 117 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 SCAF4O95104 1147 aaKnown RBP10.26□□□□□ -0.77
USP3-213ENST00000559711 IFNA5P01569 189 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 IGLV2-23P01705 113 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 LGALS7P47929 136 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 RAB5CP51148 216 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 RPS16P62249 146 aaKnown RBP10.26□□□□□ -0.77
USP3-213ENST00000559711 RPP30P78346 268 aaKnown RBP10.26□□□□□ -0.77
USP3-213ENST00000559711 BLOC1S1P78537 153 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 PRB3Q04118 309 aaPredicted RBP10.26□□□□□ -0.77
USP3-213ENST00000559711 HCP5Q6MZN7 132 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 OR4A5Q8NH83 315 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 CLCC1Q96S66 551 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 MS4A7Q9GZW8 240 aaPredicted RBP10.26□□□□□ -0.77
USP3-213ENST00000559711 HIPK2Q9H2X6 1198 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 FKBP11Q9NYL4 201 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 OR51B2Q9Y5P1 312 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 INSIG2Q9Y5U4 225 aa10.26□□□□□ -0.77
USP3-213ENST00000559711 ODF3BA8MYP8 253 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 NDUFS8O00217 210 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 FGF2P09038 288 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 OR8U8P0C7N1 319 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 COX6B1P14854 86 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 SLC38A11Q08AI6 406 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 OR10P1Q8NGE3 313 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 VSTM2AQ8TAG5 236 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 TMEM167AQ8TBQ9 72 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 PINX1Q96BK5 328 aaKnown RBP10.25□□□□□ -0.77
USP3-213ENST00000559711 HEYLQ9NQ87 328 aaPredicted RBP10.25□□□□□ -0.77
USP3-213ENST00000559711 PARP11Q9NR21 331 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 SIRT7Q9NRC8 400 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 AKAP6Q13023 2319 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 DOCK11Q5JSL3 2073 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 IGHV2-70DA0A0C4DH43 119 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 NUDT19A8MXV4 375 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 PAX1P15863 534 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
USP3-213ENST00000559711 LRRC75BQ2VPJ9 315 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 PXDC1Q5TGL8 231 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 OR8G2PQ6IF36 304 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 LILRB2Q8N423 598 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 OR5B3Q8NH48 314 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 C10orf105Q8TEF2 133 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 FAM168AQ92567 244 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 MARC2Q969Z3 335 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 RPEQ96AT9 228 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 SIRPDQ9H106 197 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
USP3-213ENST00000559711 POLR3KQ9Y2Y1 108 aaPredicted RBP10.25□□□□□ -0.77
USP3-213ENST00000559711 TEX50A0A1B0GTY4 177 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 VWC2LB2RUY7 222 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 UMAD1C9J7I0 102 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 TRIM77I1YAP6 450 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 HTR1DP28221 377 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 HOXA1P49639 335 aaPredicted RBP10.24□□□□□ -0.77
USP3-213ENST00000559711 ATP5J2P56134 94 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 LCN2P80188 198 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 PRCDQ00LT1 54 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 VWC2Q2TAL6 325 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 TPTE2P1Q5T6R2 138 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 BTNL8Q6UX41 500 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 SCGB1C1Q8TD33 95 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 RITA1Q96K30 269 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 PIMREGQ9BSJ6 248 aa10.24□□□□□ -0.77
USP3-213ENST00000559711 TACC2O95359 2948 aa10.23□□□□□ -0.77
USP3-213ENST00000559711 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
USP3-213ENST00000559711 IGHV3-72A0A0B4J1Y9 119 aa10.23□□□□□ -0.77
USP3-213ENST00000559711 A0A1W2PPI3 338 aa10.23□□□□□ -0.77
USP3-213ENST00000559711 RAB19A4D1S5 217 aa10.23□□□□□ -0.77
USP3-213ENST00000559711 TEX46H3BTG2 121 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms