RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FXYD3Q14802 87 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 PLGLAQ15195 96 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 ECSCRQ19T08 205 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 VMA21Q3ZAQ7 101 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 ETV3LQ6ZN32 361 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 C19orf35Q6ZS72 473 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 SSX9Q7RTT3 188 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 GRPEL2Q8TAA5 225 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 LHFPL5Q8TAF8 219 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 ZNF486Q96H40 463 aaPredicted RBP8.92□□□□□ -0.98
SNX1-204ENST00000559061 BATF3Q9NR55 127 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 COMMD9Q9P000 198 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 A0A0G2JRQ6 117 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 A0A1W2PRX2 142 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 H0Y980 276 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 OR2A4O95047 310 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 IGKV1-5P01602 117 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 OR9G9P0C7N8 305 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 G6PCP35575 357 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 RPL23AP62750 156 aaKnown RBP8.91□□□□□ -0.98
SNX1-204ENST00000559061 GNB1P62873 340 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 SUPT4H1P63272 117 aaKnown RBP8.91□□□□□ -0.98
SNX1-204ENST00000559061 ZNF45Q02386 682 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 FOXE3Q13461 319 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 SURF2Q15527 256 aaPredicted RBP8.91□□□□□ -0.98
SNX1-204ENST00000559061 SP6Q3SY56 376 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 LPCAT3Q6P1A2 487 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 LINC00299Q6ZSB3 139 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 NDUFA11Q86Y39 141 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 CMTM1Q8IZ96 169 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 TOMM5Q8N4H5 51 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 LFNGQ8NES3 379 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 SRSF12Q8WXF0 261 aaKnown RBP8.91□□□□□ -0.98
SNX1-204ENST00000559061 BORCS5Q969J3 196 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 R3HDM4Q96D70 268 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 SEC22AQ96IW7 307 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 OR2A7Q96R45 310 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 PRRT1Q99946 306 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 FAM212BQ9NTI7 297 aaPredicted RBP8.91□□□□□ -0.98
SNX1-204ENST00000559061 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 BET1LQ9NYM9 111 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 PRR13Q9NZ81 148 aa8.91□□□□□ -0.98
SNX1-204ENST00000559061 CRYM-AS1A6NIL9 109 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 MARCH11A6NNE9 402 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 UPK2O00526 184 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 APELAP0DMC3 54 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 NQO2P16083 231 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 VDAC1P21796 283 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 UCP1P25874 307 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 CCR6P51684 374 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 DEFA5Q01523 94 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 IFITM3Q01628 133 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 CBX3Q13185 183 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 TNXAQ16473 311 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 IZUMO4Q1ZYL8 232 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 NSUN5P1Q3KNT7 163 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 OR4X2Q8NGF9 303 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 MCUBQ9NWR8 336 aa8.9□□□□□ -0.98
SNX1-204ENST00000559061 DNAH3Q8TD57 4116 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 C3orf85A0A1B0GTC6 90 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 A0A1W2PN81 502 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 TCRBV4S1A1TA0A5B7 111 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 HMX3A6NHT5 357 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 MSGN1A6NI15 193 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 HRASP01112 189 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 ELANEP08246 267 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 OR5AC1P0C628 307 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 CHRNA7P36544 502 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 OR2B8PP59922 312 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 AKIRIN2Q53H80 203 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 TEX38Q6PEX7 206 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 UNQ5815/PRO19632Q6UWF5 114 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 MMD2Q8IY49 270 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 CADM3Q8N126 398 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 TCTEX1D1Q8N7M0 179 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 ZFAND1Q8TCF1 268 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 CD300LFQ8TDQ1 290 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 GLYATL2Q8WU03 294 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 NAA60Q9H7X0 242 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 GNB4Q9HAV0 340 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 TBC1D24Q9ULP9 559 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 FOXA2Q9Y261 457 aaPredicted RBP8.89□□□□□ -0.99
SNX1-204ENST00000559061 NSG2Q9Y328 171 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 DMRT1Q9Y5R6 373 aa8.89□□□□□ -0.99
SNX1-204ENST00000559061 TSSC4Q9Y5U2 329 aaPredicted RBP8.89□□□□□ -0.99
SNX1-204ENST00000559061 LINC00854A0A1B0GVQ3 168 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 IGLC7A0M8Q6 106 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 KRASP01116 189 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 OPN1MWP04001 364 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 OPN1MW2P0DN77 364 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 OPN1MW3P0DN78 364 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 AREGP15514 252 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 HLA-GP17693 338 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 CD40LGP29965 261 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 ECI1P42126 302 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 RPL8P62917 257 aaKnown RBP8.88□□□□□ -0.99
SNX1-204ENST00000559061 SLC35B1P78383 322 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 C2orf68Q2NKX9 166 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 DEFB136Q30KP8 78 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 ZNF57Q68EA5 555 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms