RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SBSPONQ8IVN8 264 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 FAM223AQ8IWN6 122 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 TEX45Q8NA69 505 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 OR5T1Q8NG75 326 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 ACOT12Q8WYK0 555 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 DDB2Q92466 427 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 DCSTAMPQ9H295 470 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 SLC25A32Q9H2D1 315 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 OR2W1Q9Y3N9 320 aa6.17□□□□□ -1.42
TRAF3-205ENST00000558700 SMIM30A4D0T7 59 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 TMEM235A6NFC5 223 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 LINC00473A8K010 186 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 OR2A4O95047 310 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 OR9G9P0C7N8 305 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 APELAP0DMC3 54 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SYNJ2BPP57105 145 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 GNG2P59768 71 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 DYRK1AQ13627 763 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 EXOSC2Q13868 293 aaKnown RBP6.16□□□□□ -1.42
TRAF3-205ENST00000558700 RPEL1Q2QD12 228 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 CDNFQ49AH0 187 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SFXN4Q6P4A7 337 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 GTSCR1Q86UQ5 136 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 TPRA1Q86W33 373 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 NR2C2APQ86WQ0 139 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 MMD2Q8IY49 270 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SPARTQ8N0X7 666 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 ADAD2Q8NCV1 583 aaKnown RBP6.16□□□□□ -1.42
TRAF3-205ENST00000558700 OR9G4Q8NGQ1 327 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 OR4S2Q8NH73 311 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 VSTM2AQ8TAG5 236 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 MUC7Q8TAX7 377 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 LGALS14Q8TCE9 139 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 NUDCD2Q8WVJ2 157 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SNAPC3Q92966 411 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 HSD17B10Q99714 261 aaKnown RBP6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SPIN2AQ99865 258 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SPIN2BQ9BPZ2 258 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 DCUN1D5Q9BTE7 237 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 TXNL4BQ9NX01 149 aaKnown RBP6.16□□□□□ -1.42
TRAF3-205ENST00000558700 PEMTQ9UBM1 199 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 PEF1Q9UBV8 284 aaKnown RBP6.16□□□□□ -1.42
TRAF3-205ENST00000558700 DAPK2Q9UIK4 370 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 SSR3Q9UNL2 185 aa6.16□□□□□ -1.42
TRAF3-205ENST00000558700 RBMX2Q9Y388 322 aaKnown RBP6.16□□□□□ -1.42
TRAF3-205ENST00000558700 IGKV1D-8A0A087WSZ0 117 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 MSGN1A6NI15 193 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 SRRM4A7MD48 611 aaKnown RBP6.15□□□□□ -1.42
TRAF3-205ENST00000558700 A8MZ25 164 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 FCGR3BO75015 233 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 HLA-DQB1P01920 261 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 IGHV4-30-4P0DP06 118 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 NFYAP23511 347 aaPredicted RBP6.15□□□□□ -1.42
TRAF3-205ENST00000558700 RHOGP84095 191 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 KLF5Q13887 457 aaPredicted RBP6.15□□□□□ -1.42
TRAF3-205ENST00000558700 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 OR2B11Q5JQS5 317 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 CNIH2Q6PI25 160 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 IDO2Q6ZQW0 420 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 SLC25A42Q86VD7 318 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 Q8N402 240 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 OR2K2Q8NGT1 345 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 TCTEX1D2Q8WW35 142 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 ST6GALNAC5Q9BVH7 336 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 ZNF430Q9H8G1 570 aaPredicted RBP6.15□□□□□ -1.42
TRAF3-205ENST00000558700 PALMDQ9NP74 551 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 RHBDL2Q9NX52 303 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 SIGLEC8Q9NYZ4 499 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 ANXA10Q9UJ72 324 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 ELF5Q9UKW6 265 aaPredicted RBP6.15□□□□□ -1.42
TRAF3-205ENST00000558700 ZNF257Q9Y2Q1 563 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 RRP15Q9Y3B9 282 aaKnown RBP6.15□□□□□ -1.42
TRAF3-205ENST00000558700 ETV7Q9Y603 341 aa6.15□□□□□ -1.42
TRAF3-205ENST00000558700 TNCP24821 2201 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 A0A0A6YYH2 397 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 DPPA5A6NC42 116 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 A6NJ64 397 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 J3QRK9 145 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 AIREO43918 545 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 KBTBD11O94819 623 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 ATP6V1G2O95670 118 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 TRBV12-3P01733 135 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 LYL1P12980 280 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 KIR2DS2P43631 304 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 ARPC4P59998 168 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 ATP5G2Q06055 141 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 MLANAQ16655 118 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 MRGPRG-AS1Q2M3A8 158 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 C10orf55Q5SWW7 151 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 ZNF773Q6PK81 442 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 ZNF66Q6ZN08 573 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 NECAP1Q8NC96 275 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 DYNLRB2Q8TF09 96 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 ISOC1Q96CN7 298 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 TM2D3Q9BRN9 247 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 YTHDF1Q9BYJ9 559 aaKnown RBP6.14□□□□□ -1.43
TRAF3-205ENST00000558700 AKIP1Q9NQ31 210 aa6.14□□□□□ -1.43
TRAF3-205ENST00000558700 TRBV9A0A0B4J1U6 114 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 IGKV1D-13A0A0B4J2D9 117 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms