RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FUNDC2Q9BWH2 189 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 CST11Q9H112 138 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 GHITMQ9H3K2 345 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 FBXL15Q9H469 300 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 RDH8Q9NYR8 311 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 KCNIP1Q9NZI2 227 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 FBXL17Q9UF56 701 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 SSR3Q9UNL2 185 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 OR2W1Q9Y3N9 320 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 TGP01266 2768 aa3.29□□□□□ -1.88
SPG11-211ENST00000558561 PRKDCP78527 4128 aaKnown RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 MEGF8Q7Z7M0 2845 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 A0A087WXM4 84 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 TRBV6-7A0A0A0MS04 114 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 IGHV7-81A0A0B4J1V7 117 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 A0A1B0GUS0 222 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 TCRBV4S1A1TA0A5B7 111 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 H0YJW9 148 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 PDCD5O14737 125 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 ARPC1BO15143 372 aaKnown RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 FABP7O15540 132 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 LANCL1O43813 399 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 AIREO43918 545 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 SOX15O60248 233 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 IGLV2-23P01705 113 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 IGHG2P01859 326 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 HLA-DQB1P01920 261 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 IGKV1-16P04430 117 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 EIF4EP06730 217 aaKnown RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 FCGR3AP08637 254 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 FAM106CPP0CH98 169 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 APELAP0DMC3 54 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 HIST1H1DP16402 221 aaKnown RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 CEACAM3P40198 252 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 MNDAP41218 407 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 ALDH3B2P48448 385 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 CAMPP49913 170 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 RAB7AP51149 207 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 ZNF137PP52743 207 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 ACTBP60709 375 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 ARFRP1Q13795 201 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 SPCS2Q15005 226 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 C6orf183Q5T699 404 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 GPR107Q5VW38 600 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 C19orf35Q6ZS72 473 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 TGIF2LXQ8IUE1 241 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 OR8H3Q8N146 312 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 FAM71E2Q8N5Q1 922 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 C8orf31Q8N9H6 132 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 OR13F1Q8NGS4 319 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 OR2T10Q8NGZ9 312 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 CPNE2Q96FN4 548 aaPredicted RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 KCTD7Q96MP8 289 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 OR5B12Q96R08 314 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 URM1Q9BTM9 101 aaKnown RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 KRTAP1-5Q9BYS1 174 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 ALX4Q9H161 411 aaPredicted RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 ABCG5Q9H222 651 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 RANBP3Q9H6Z4 567 aaPredicted RBP3.28□□□□□ -1.88
SPG11-211ENST00000558561 SPACA1Q9HBV2 294 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 CCL28Q9NRJ3 127 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 SDHAF2Q9NX18 166 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 BLOC1S6Q9UL45 172 aa3.28□□□□□ -1.88
SPG11-211ENST00000558561 TRAV3A0A0B4J244 114 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 A0A1B0GW64 132 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 PSMB11A5LHX3 300 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 OOSP1A8MZH6 123 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 M0R1X1 148 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 CTDSP2O14595 271 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 BUB3O43684 328 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 HPGDSO60760 199 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 CA11O75493 328 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 TPPPO94811 219 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 MOSP00540 346 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 CRYGBP07316 175 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 RPA2P15927 270 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 ELK1P19419 428 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 GALP22466 123 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 MYL9P24844 172 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 SERPINB10P48595 397 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 PSMD7P51665 324 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 CX3CL1P78423 397 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 EIF4EBP1Q13541 118 aaPredicted RBP3.27□□□□□ -1.89
SPG11-211ENST00000558561 PSG5Q15238 335 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 Q3ZCU0 254 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 OR2B11Q5JQS5 317 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 LY6G6FQ5SQ64 297 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 HACD4Q5VWC8 232 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 IDO2Q6ZQW0 420 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 SLC35E3Q7Z769 313 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 CCDC190Q86UF4 302 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 TPRA1Q86W33 373 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 H1FOOQ8IZA3 346 aaPredicted RBP3.27□□□□□ -1.89
SPG11-211ENST00000558561 VKORC1L1Q8N0U8 176 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 STPG2Q8N412 459 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 NPBQ8NG41 125 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 OR5T1Q8NG75 326 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 OR56B1Q8NGI3 324 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 PTX4Q96A99 478 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 MS4A10Q96PG2 267 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms