RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 TCTEX1D1Q8N7M0 179 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 OR4C5Q8NGB2 326 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 OR51T1Q8NGJ9 327 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 OR5D18Q8NGL1 313 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 OR11L1Q8NGX0 322 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 SGMS2Q8NHU3 365 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 OR51E1Q8TCB6 317 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 RNF138Q8WVD3 245 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 C11orf40Q8WZ69 217 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 LSM10Q969L4 123 aaKnown RBP2.65□□□□□ -1.99
HERC1-203ENST00000558532 TOMM40LQ969M1 308 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 C11orf52Q96A22 123 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 APH1AQ96BI3 265 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 REEP6Q96HR9 211 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 PGAM5Q96HS1 289 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 KCNS1Q96KK3 526 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 BMFQ96LC9 184 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 KLHDC3Q9BQ90 382 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 HSPB9Q9BQS6 159 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 ST6GALNAC5Q9BVH7 336 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 GNB1LQ9BYB4 327 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 VSIRQ9H7M9 311 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 HES4Q9HCC6 221 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 FAM60AQ9NP50 221 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 PHPT1Q9NRX4 125 aaPredicted RBP2.65□□□□□ -1.99
HERC1-203ENST00000558532 ZNF586Q9NXT0 402 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 CCL26Q9Y258 94 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 TRAPPC1Q9Y5R8 145 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 ARL2-SNX15V9GYD0 113 aa2.65□□□□□ -1.99
HERC1-203ENST00000558532 CHD3Q12873 2000 aaKnown RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 CACNA1CQ13936 2221 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TRBV20OR9-2A0A075B6H5 130 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TMED7-TICAM2A0A0A6YYA0 188 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TRBV6-6A0A0A6YYG2 114 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 A0A0J9YY10 115 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 A0A0U1RQK1 487 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ZNF320A2RRD8 509 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 LRP5LA4QPB2 252 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 PMS2P5A8MQ11 134 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 C11orf98E9PRG8 122 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 H0YJW9 148 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 M0QZ24 198 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 CORTO00230 105 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SLC33A1O00400 549 aaPredicted RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 TAX1BP3O14907 124 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 CRXO43186 299 aaPredicted RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 RBFOX2O43251 390 aaKnown RBP eCLIP2.64□□□□□ -1.99
HERC1-203ENST00000558532 SPINT2O43291 252 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ADAM20O43506 726 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 CHST1O43916 411 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ZNF324O75467 553 aaPredicted RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 CST7O76096 145 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 S1PR2O95136 353 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 UTS2O95399 124 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 NAPSAO96009 420 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TNFP01375 233 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 IGKV3-11P04433 115 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 CRISP2P16562 243 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 MSR1P21757 451 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TUBG1P23258 451 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TIMP3P35625 211 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 OR1D4P47884 311 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ASCL1P50553 236 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 FBXW4P57775 412 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 GRB2P62993 217 aaKnown RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 HBG1P69891 147 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 HBG2P69892 147 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 MRPS34P82930 218 aaKnown RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 PSG4Q00888 419 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 RBPJQ06330 500 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 IGFBP7Q16270 282 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 BATFQ16520 125 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SMIM21Q3B7S5 101 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 MS4A18Q3C1V0 323 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SNAI3Q3KNW1 292 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 MAJINQ3KP22 176 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 POM121L1PQ3SYA9 428 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 PHLDA2Q53GA4 152 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SLC25A53Q5H9E4 307 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 LDLRAD2Q5SZI1 272 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 FAM78BQ5VT40 261 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 OTPQ5XKR4 325 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SLC25A47Q6Q0C1 308 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 LCN15Q6UWW0 184 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 Q6ZN92 141 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 NFE4Q86UQ8 179 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 Q8N7P7 452 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 NECAP1Q8NC96 275 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TMEM116Q8NCL8 245 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 OR13A1Q8NGR1 328 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 OR4S2Q8NH73 311 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 VN1R17PQ8TDU5 208 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TMEM234Q8WY98 164 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ST8SIA1Q92185 356 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 FAM3CQ92520 227 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 PSMF1Q92530 271 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TAF15Q92804 592 aaKnown RBP eCLIP2.64□□□□□ -1.99
HERC1-203ENST00000558532 LHX4Q969G2 390 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms