RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 RRASP10301 218 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 RPS27AP62979 156 aaKnown RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 TMEM187Q14656 261 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 RBMY1FQ15415 496 aaKnown RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 KLK9Q2XQG4 91 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 Q499Y3 187 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 MMD2Q8IY49 270 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 CENPSQ8N2Z9 138 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 SMIM19Q96E16 107 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 RIMS4Q9H426 269 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 SDHAF2Q9NX18 166 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 GHRLQ9UBU3 117 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 AASSQ9UDR5 926 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 KLK9Q9UKQ9 250 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 MGAT4AQ9UM21 535 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 SRRM2Q9UQ35 2752 aaKnown RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 TRBV5-7A0A0A0MS05 114 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 IGHV4-28A0A0C4DH34 117 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 IGHV3-35A0A0C4DH35 117 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 A0A1W2PPK0 400 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 DPPA5A6NC42 116 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 MFSD2BA6NFX1 497 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 OGG1O15527 345 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 CRYZL1O95825 349 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 CRYGCP07315 174 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 CTSDP07339 412 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 IL6RP08887 468 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 SAA1P0DJI8 122 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 GABRB1P18505 474 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 HTR2CP28335 458 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 GPR183P32249 361 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 CMC4P56277 68 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 TPBGQ13641 420 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 CDK10Q15131 360 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 HSP90B2PQ58FF3 399 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 C1orf134Q5TEV5 83 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 OR10K2Q6IF99 312 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 Q6ZRM9 215 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 AMIGO2Q86SJ2 522 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 OR52I1Q8NGK6 324 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 OSR1Q8TAX0 266 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 FYTTD1Q96QD9 318 aaKnown RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 UQCC2Q9BRT2 126 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 NICN1Q9BSH3 213 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 HDHD3Q9BSH5 251 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 NDUFAF3Q9BU61 184 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF436Q9C0F3 470 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 OR2D2Q9H210 308 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 AMBNQ9NP70 447 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 DAZ1Q9NQZ3 744 aaKnown RBP4.88□□□□□ -1.63
LRRC28-207ENST00000558500 SLC2A9Q9NRM0 540 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 POMPQ9Y244 141 aa4.88□□□□□ -1.63
LRRC28-207ENST00000558500 IGLV11-55A0A075B6I3 123 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 DEFB131BA0A096LNP1 70 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 A0A1B0GW64 132 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 C15orf61A6NNL5 157 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 LINC00473A8K010 186 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 E7EUB6 86 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 DHFRP00374 187 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 LALBAP00709 142 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 IFNA10P01566 189 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 CD74P04233 296 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 UBBP0CG47 229 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 MIFP14174 115 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 AREGP15514 252 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 RPA2P15927 270 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 HIST1H1BP16401 226 aaKnown RBP4.87□□□□□ -1.63
LRRC28-207ENST00000558500 DUTP33316 252 aaKnown RBP4.87□□□□□ -1.63
LRRC28-207ENST00000558500 RPS11P62280 158 aaKnown RBP eCLIP4.87□□□□□ -1.63
LRRC28-207ENST00000558500 YIF1BQ5BJH7 314 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 OR2G6Q5TZ20 316 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 PLET1Q6UQ28 207 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 NKAIN3Q8N8D7 197 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF502Q8TBZ5 544 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 CXorf58Q96LI9 332 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 CHRDL1Q9BU40 450 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 SCRT1Q9BWW7 348 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 TM2D1Q9BX74 207 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 Q9N2K0 584 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 C12orf4Q9NQ89 552 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 PLEKHJ1Q9NW61 149 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF446Q9NWS9 450 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 BABAM2Q9NXR7 383 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 AK3Q9UIJ7 227 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 OAZ3Q9UMX2 235 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
LRRC28-207ENST00000558500 FAT1Q14517 4588 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 A0A0A6YYD4 124 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 TRDCB7Z8K6 153 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 TGOLN2O43493 480 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 MRPS14O60783 128 aaKnown RBP4.86□□□□□ -1.63
LRRC28-207ENST00000558500 IFNA21P01568 189 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 IFNA17P01571 189 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 CD3GP09693 182 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF735P0CB33 412 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 SRMP19623 302 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms