RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 VSIG4Q9Y279 399 aa20.07■□□□□ 0.8
SMAD6-202ENST00000557916 C3orf85A0A1B0GTC6 90 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 NAP1L6A6NFF2 107 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 H0Y980 276 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 ERVK-16P61578 105 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 CFHR3Q02985 330 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 ECSCRQ19T08 205 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 SGMS2Q8NHU3 365 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 BET1LQ9NYM9 111 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 NUBP2Q9Y5Y2 271 aa20.06■□□□□ 0.8
SMAD6-202ENST00000557916 MARCH11A6NNE9 402 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 ACTL6BO94805 426 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 KRASP01116 189 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 SERPINE2P07093 398 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 RPA2P15927 270 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 CD40LGP29965 261 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 CRIP2P52943 208 aaPredicted RBP20.05■□□□□ 0.8
SMAD6-202ENST00000557916 CD83Q01151 205 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 TMEM267Q0VDI3 215 aaPredicted RBP20.05■□□□□ 0.8
SMAD6-202ENST00000557916 ZNF846Q147U1 533 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 TCTEX1D4Q5JR98 221 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 COMMD1Q8N668 190 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 OR4A5Q8NH83 315 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 TP53RKQ96S44 253 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 CITED2Q99967 270 aaPredicted RBP20.05■□□□□ 0.8
SMAD6-202ENST00000557916 WDR12Q9GZL7 423 aaKnown RBP20.05■□□□□ 0.8
SMAD6-202ENST00000557916 TMEM140Q9NV12 185 aa20.05■□□□□ 0.8
SMAD6-202ENST00000557916 TEX13DA0A0J9YY54 714 aaPredicted RBP20.04■□□□□ 0.8
SMAD6-202ENST00000557916 CENPXA8MT69 81 aa20.04■□□□□ 0.8
SMAD6-202ENST00000557916 TEX38Q6PEX7 206 aa20.04■□□□□ 0.8
SMAD6-202ENST00000557916 LFNGQ8NES3 379 aa20.04■□□□□ 0.8
SMAD6-202ENST00000557916 SLC25A21Q9BQT8 299 aaPredicted RBP20.04■□□□□ 0.8
SMAD6-202ENST00000557916 C7orf50Q9BRJ6 194 aaKnown RBP20.04■□□□□ 0.8
SMAD6-202ENST00000557916 PPIFP30405 207 aaKnown RBP20.03■□□□□ 0.8
SMAD6-202ENST00000557916 G6PCP35575 357 aa20.03■□□□□ 0.8
SMAD6-202ENST00000557916 SP6Q3SY56 376 aa20.03■□□□□ 0.8
SMAD6-202ENST00000557916 UNQ5815/PRO19632Q6UWF5 114 aa20.03■□□□□ 0.8
SMAD6-202ENST00000557916 ADAD2Q8NCV1 583 aaKnown RBP20.03■□□□□ 0.8
SMAD6-202ENST00000557916 NAA60Q9H7X0 242 aa20.03■□□□□ 0.8
SMAD6-202ENST00000557916 TCRBV4S1A1TA0A5B7 111 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 CRYM-AS1A6NIL9 109 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 B3GALNT1O75752 331 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 IGKV1-39P01597 117 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 IGHG4P01861 327 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 IGKV1D-39P04432 117 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 IL6RP08887 468 aaPredicted RBP20.02■□□□□ 0.8
SMAD6-202ENST00000557916 CCR6P51684 374 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 RPL8P62917 257 aaKnown RBP20.02■□□□□ 0.8
SMAD6-202ENST00000557916 AKIRIN2Q53H80 203 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 C19orf54Q5BKX5 351 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 MINDY2Q8NBR6 621 aa20.02■□□□□ 0.8
SMAD6-202ENST00000557916 SRSF12Q8WXF0 261 aaKnown RBP20.02■□□□□ 0.8
SMAD6-202ENST00000557916 MSGN1A6NI15 193 aa20.02■□□□□ 0.79
SMAD6-202ENST00000557916 UPK2O00526 184 aa20.02■□□□□ 0.79
SMAD6-202ENST00000557916 MAS1LP35410 378 aa20.02■□□□□ 0.79
SMAD6-202ENST00000557916 SGPP2Q8IWX5 399 aa20.02■□□□□ 0.79
SMAD6-202ENST00000557916 TRAV3A0A0B4J244 114 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 PLA2G10O15496 165 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 OPN1MWP04001 364 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 ELANEP08246 267 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 OR5AC1P0C628 307 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 OPN1MW2P0DN77 364 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 OPN1MW3P0DN78 364 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 AKR1C4P17516 323 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 UCP1P25874 307 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 FOXE3Q13461 319 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 RBMS2Q15434 407 aaKnown RBP20.01■□□□□ 0.79
SMAD6-202ENST00000557916 TRIM16LQ309B1 348 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 KHDC1LQ5JSQ8 128 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 C10orf55Q5SWW7 151 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 TMEM230Q96A57 120 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 SEC22AQ96IW7 307 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 PHB2Q99623 299 aa20.01■□□□□ 0.79
SMAD6-202ENST00000557916 TSSC4Q9Y5U2 329 aaPredicted RBP20.01■□□□□ 0.79
SMAD6-202ENST00000557916 TNCP24821 2201 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 A0A1W2PN81 502 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 HLA-GP17693 338 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 CHRNA7P36544 502 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 NSUN5P1Q3KNT7 163 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 TMED4Q7Z7H5 227 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 NDUFA11Q86Y39 141 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 CADM3Q8N126 398 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 TMEM222Q9H0R3 208 aa20■□□□□ 0.79
SMAD6-202ENST00000557916 FOXA2Q9Y261 457 aaPredicted RBP20■□□□□ 0.79
SMAD6-202ENST00000557916 M0QZ24 198 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 IGLV1-40P01703 118 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 CXorf66Q5JRM2 361 aaPredicted RBP19.99■□□□□ 0.79
SMAD6-202ENST00000557916 LCNL1Q6ZST4 164 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 TMEM68Q96MH6 324 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 SPIN2AQ99865 258 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 SPIN2BQ9BPZ2 258 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 KCNIP3Q9Y2W7 256 aa19.99■□□□□ 0.79
SMAD6-202ENST00000557916 TET2Q6N021 2002 aaPredicted RBP19.99■□□□□ 0.79
SMAD6-202ENST00000557916 LYRM1O43325 122 aa19.98■□□□□ 0.79
SMAD6-202ENST00000557916 PSMB8P28062 276 aa19.98■□□□□ 0.79
SMAD6-202ENST00000557916 BTCP35070 178 aa19.98■□□□□ 0.79
SMAD6-202ENST00000557916 RPL27AP46776 148 aaKnown RBP19.98■□□□□ 0.79
SMAD6-202ENST00000557916 DHODHQ02127 395 aa19.98■□□□□ 0.79
SMAD6-202ENST00000557916 ASPHD1Q5U4P2 390 aa19.98■□□□□ 0.79
SMAD6-202ENST00000557916 H2BFWTQ7Z2G1 175 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms