RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SLC35D1Q9NTN3 355 aa5.97□□□□□ -1.45
SPG11-204ENST00000557866 TMEM140Q9NV12 185 aa5.97□□□□□ -1.45
SPG11-204ENST00000557866 ITGB1BP2Q9UKP3 347 aa5.97□□□□□ -1.45
SPG11-204ENST00000557866 WSB1Q9Y6I7 421 aa5.97□□□□□ -1.45
SPG11-204ENST00000557866 SPTAN1Q13813 2472 aaKnown RBP5.96□□□□□ -1.46
SPG11-204ENST00000557866 FGF16O43320 207 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 JTBO76095 146 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 LIPFP07098 398 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 MYOD1P15172 320 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 COX7A1P24310 79 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 TAS2R30P59541 319 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 RAB14P61106 215 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 ERVK-16P61578 105 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 LMO4P61968 165 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 ARF6P62330 175 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 RPL23AP62750 156 aaKnown RBP5.96□□□□□ -1.46
SPG11-204ENST00000557866 PAX2Q02962 417 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 CLINT1Q14677 625 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 FAM71F2Q6NXP2 309 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 TMEM14EPQ6UXP3 125 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 UBAC2Q8NBM4 344 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 OR13D1Q8NGV5 346 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 TMED6Q8WW62 240 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 TMEM186Q96B77 213 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 GINS3Q9BRX5 216 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 CLEC7AQ9BXN2 247 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 REG4Q9BYZ8 158 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 BPESC1Q9GZL8 116 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 BARX1Q9HBU1 254 aaPredicted RBP5.96□□□□□ -1.46
SPG11-204ENST00000557866 PSENENQ9NZ42 101 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 ONECUT1Q9UBC0 465 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 RFNGQ9Y644 331 aa5.96□□□□□ -1.46
SPG11-204ENST00000557866 DSCAML1Q8TD84 2053 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 A0A1W2PPH5 198 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 A1L4Q6 167 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 ANKRD34BA5PLL1 514 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 PMS2P5A8MQ11 134 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 LY6LH3BQJ8 138 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 TEX46H3BTG2 121 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 M0R1W7 72 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 MED6O75586 246 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 METTL15P1P0C7V9 234 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 RRASP10301 218 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 VDAC2P45880 294 aaPredicted RBP5.95□□□□□ -1.46
SPG11-204ENST00000557866 SULT1A1P50225 295 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 PDLIM4P50479 330 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 ARHGDIBP52566 201 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 BAXQ07812 192 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 KLRD1Q13241 179 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 RTL8BQ17RB0 113 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 HLA-DRB5Q30154 266 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 PDLIM3Q53GG5 364 aaPredicted RBP5.95□□□□□ -1.46
SPG11-204ENST00000557866 TMEM177Q53S58 311 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 SPANXN5Q5MJ07 72 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 SP5Q6BEB4 398 aaPredicted RBP5.95□□□□□ -1.46
SPG11-204ENST00000557866 DHRS7BQ6IAN0 325 aaPredicted RBP5.95□□□□□ -1.46
SPG11-204ENST00000557866 OR4A47Q6IF82 309 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 COMMD7Q86VX2 200 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 STPG2Q8N412 459 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 PNKDQ8N490 385 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 TMEM217Q8N7C4 229 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 BEND2Q8NDZ0 799 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 OR4P4Q8NGL7 312 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 OR5C1Q8NGR4 320 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 OR52E5Q8NH55 327 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 OR4A16Q8NH70 328 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 CLDND2Q8NHS1 167 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 DTD1Q8TEA8 209 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 NRGNQ92686 78 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 TNFRSF14Q92956 283 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 RITA1Q96K30 269 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 CCL19Q99731 98 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 PCGF1Q9BSM1 259 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 SH3BGRL3Q9H299 93 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 TMEM14BQ9NUH8 114 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 MED9Q9NWA0 146 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 FOXA2Q9Y261 457 aaPredicted RBP5.95□□□□□ -1.46
SPG11-204ENST00000557866 FLNCQ14315 2725 aa5.95□□□□□ -1.46
SPG11-204ENST00000557866 BORCS7-ASMTA0A0B4J1R7 106 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 IGHV3-72A0A0B4J1Y9 119 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 MFSD2BA6NFX1 497 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 C15orf61A6NNL5 157 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 CEBPZOSA8MTT3 80 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 A8MXK9 166 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 BUB1B-PAK6H3BSN5 160 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 UPK2O00526 184 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 HRASP01112 189 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 IGLV2-23P01705 113 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 APOA2P02652 100 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 ARG1P05089 322 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 SAA1P0DJI8 122 aaPredicted RBP5.94□□□□□ -1.46
SPG11-204ENST00000557866 SPP1P10451 314 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 PRTN3P24158 256 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 IL3RAP26951 378 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 SULT1A2P50226 295 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 PRRX1P54821 245 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 SPCS3P61009 180 aa5.94□□□□□ -1.46
SPG11-204ENST00000557866 RPS16P62249 146 aaKnown RBP5.94□□□□□ -1.46
SPG11-204ENST00000557866 EIF5AP63241 154 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms