RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 KLK11Q9UBX7 282 aa6.53□□□□□ -1.36
PSEN1-223ENST00000557511 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
PSEN1-223ENST00000557511 VSIG4Q9Y279 399 aa6.53□□□□□ -1.36
PSEN1-223ENST00000557511 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 C13orf42A0A1B0GVH6 325 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 H3BUA1 57 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 M0QYG6 137 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 RGS13O14921 159 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 CTDSPLO15194 276 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 PGLYRP1O75594 196 aaPredicted RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 ATG12O94817 140 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 DHFRP00374 187 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 IGLV2-23P01705 113 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 CD3DP04234 171 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 RLN1P04808 185 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 PSMB8P28062 276 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 PPIFP30405 207 aaKnown RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 GNRHRP30968 328 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 MAS1LP35410 378 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 INPP1P49441 399 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 RAB9AP51151 201 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 CRIP2P52943 208 aaPredicted RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 TPPP2P59282 170 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 TAS2R31P59538 309 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 IDO2Q6ZQW0 420 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 SSX9Q7RTT3 188 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 MINDY2Q8NBR6 621 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 ZFAND1Q8TCF1 268 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 RCC1LQ96I51 464 aaKnown RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 UBE2E2Q96LR5 201 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 ABHD1Q96SE0 405 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 MIXL1Q9H2W2 232 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 COA4Q9NYJ1 87 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 ZMAT5Q9UDW3 170 aaKnown RBP6.52□□□□□ -1.37
PSEN1-223ENST00000557511 NUBP2Q9Y5Y2 271 aa6.52□□□□□ -1.37
PSEN1-223ENST00000557511 MSGN1A6NI15 193 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SRRM4A7MD48 611 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 CCL24O00175 119 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 CYB5BO43169 146 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SNAPC5O75971 98 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 KBTBD11O94819 623 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 TRGV3P03979 118 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SERPINE2P07093 398 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 CRYGBP07316 175 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 F2RP25116 425 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 RPL27AP46776 148 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 UCP3P55916 312 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 AP3S2P59780 193 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 RPL8P62917 257 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 DGCR2P98153 550 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 NDPQ00604 133 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 CFHR3Q02985 330 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 PHLDA2Q53GA4 152 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 PYDC2Q56P42 97 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SPANXN2Q5MJ10 180 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 OR5T1Q8NG75 326 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SMIM4Q8WVI0 70 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SRSF12Q8WXF0 261 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 DGCR14Q96DF8 476 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 MS4A10Q96PG2 267 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SCGB3A2Q96PL1 93 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 FYTTD1Q96QD9 318 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 TSC22D3Q99576 134 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 COMMD5Q9GZQ3 224 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SLIRPQ9GZT3 109 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 FXYD6Q9H0Q3 95 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 ZNF430Q9H8G1 570 aaPredicted RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 PLEKHA2Q9HB19 425 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 COPZ2Q9P299 210 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 SCP2D1Q9UJQ7 156 aa6.51□□□□□ -1.37
PSEN1-223ENST00000557511 C14orf166Q9Y224 244 aaKnown RBP6.51□□□□□ -1.37
PSEN1-223ENST00000557511 ARPC1BO15143 372 aaKnown RBP6.5□□□□□ -1.37
PSEN1-223ENST00000557511 OR8U8P0C7N1 319 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 HLA-GP17693 338 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 TNFSF8P32971 234 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 LPAR6P43657 344 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 PPP5CP53041 499 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 PJVKQ0ZLH3 352 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 EIF4EBP1Q13541 118 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-223ENST00000557511 TBC1D26Q86UD7 250 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 VKORC1L1Q8N0U8 176 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 ZNF491Q8N8L2 437 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 OR11H1Q8NG94 326 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 OR1N2Q8NGR9 330 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 TERB2Q8NHR7 220 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 TMEM167AQ8TBQ9 72 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 OR5B12Q96R08 314 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms