RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 TMEM167AQ8TBQ9 72 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 TMEM230Q96A57 120 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 OR2A7Q96R45 310 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 WDR12Q9GZL7 423 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 BET1LQ9NYM9 111 aa11.66□□□□□ -0.54
VIPAS39-210ENST00000557466 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 NAP1L6A6NFF2 107 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 MARCH11A6NNE9 402 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 CREBL2O60519 120 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 IGKV1-39P01597 117 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 IGKV1D-39P04432 117 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 BTCP35070 178 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 CCR6P51684 374 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 ERVK-16P61578 105 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 SLC35B1P78383 322 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 ZNF846Q147U1 533 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 MMD2Q8IY49 270 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 ADAD2Q8NCV1 583 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 DMBX1Q8NFW5 382 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 SGMS2Q8NHU3 365 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 SCGB3A2Q96PL1 93 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 CITED2Q99967 270 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 AIFM2Q9BRQ8 373 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 NAA60Q9H7X0 242 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 TMEM140Q9NV12 185 aa11.65□□□□□ -0.54
VIPAS39-210ENST00000557466 TRAV3A0A0B4J244 114 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 PLA2G10O15496 165 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 CNIH1O95406 144 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 IL6RP08887 468 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 OR5AC1P0C628 307 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 G6PCP35575 357 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 CD83Q01151 205 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 SP6Q3SY56 376 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 C7orf50Q9BRJ6 194 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 GON7Q9BXV9 100 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 NUBP2Q9Y5Y2 271 aa11.64□□□□□ -0.55
VIPAS39-210ENST00000557466 TEX13DA0A0J9YY54 714 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 ADARB2-AS1A8MUL3 147 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 UPK2O00526 184 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 KRASP01116 189 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 IGHG4P01861 327 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 SERPINE2P07093 398 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 MYOD1P15172 320 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 UCP1P25874 307 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 UNQ5815/PRO19632Q6UWF5 114 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 COMMD1Q8N668 190 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 LFNGQ8NES3 379 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 SEC22AQ96IW7 307 aa11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 SLC25A21Q9BQT8 299 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-210ENST00000557466 A0A1W2PN81 502 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 TCRBV4S1A1TA0A5B7 111 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 CENPXA8MT69 81 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 LYRM1O43325 122 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 SOX15O60248 233 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 B3GALNT1O75752 331 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 ACTL6BO94805 426 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 NDUFB6O95139 128 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 OR9G9P0C7N8 305 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 APELAP0DMC3 54 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 AKR1C4P17516 323 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 CHRNA7P36544 502 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 TMEM267Q0VDI3 215 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 FOXE3Q13461 319 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 TRIM16LQ309B1 348 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 KHDC1LQ5JSQ8 128 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 TEX38Q6PEX7 206 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 TMED4Q7Z7H5 227 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 MINDY2Q8NBR6 621 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 TMEM222Q9H0R3 208 aa11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-210ENST00000557466 A0A1B0GW64 132 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 MSGN1A6NI15 193 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 E7EUB6 86 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 UPK1BO75841 260 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 IGLV1-40P01703 118 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 HLA-GP17693 338 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 PSMB8P28062 276 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 MAS1LP35410 378 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 NSUN5P1Q3KNT7 163 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 AKIRIN2Q53H80 203 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 NDUFA11Q86Y39 141 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 SGPP2Q8IWX5 399 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 RNF152Q8N8N0 203 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 LHFPL5Q8TAF8 219 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 PHB2Q99623 299 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms