RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SRSF12Q8WXF0 261 aaKnown RBP9.73□□□□□ -0.85
SLIRP-209ENST00000557342 RCC1LQ96I51 464 aaKnown RBP9.73□□□□□ -0.85
SLIRP-209ENST00000557342 P2RX4Q99571 388 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 RSRP1Q9BUV0 290 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 TINAGL1Q9GZM7 467 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-209ENST00000557342 PLEKHA2Q9HB19 425 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
SLIRP-209ENST00000557342 TNCP24821 2201 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 FABP12A6NFH5 140 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 G3V4G9 280 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 MPPED1O15442 326 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 RAB3DO95716 219 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 CD74P04233 296 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 F2RP25116 425 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 TNFSF8P32971 234 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 ETV6P41212 452 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 TPPP2P59282 170 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 ERVK-16P61578 105 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 RUNX1Q01196 453 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 MEF2DQ14814 521 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 POU2AF1Q16633 256 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 STEAP1BQ6NZ63 245 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 MRPL41Q8IXM3 137 aaKnown RBP9.72□□□□□ -0.85
SLIRP-209ENST00000557342 OR5T1Q8NG75 326 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 ZNF486Q96H40 463 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-209ENST00000557342 RAX2Q96IS3 184 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
SLIRP-209ENST00000557342 GPR61Q9BZJ8 451 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 FAM212BQ9NTI7 297 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-209ENST00000557342 BET1LQ9NYM9 111 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 PKD1L1Q8TDX9 2849 aa9.72□□□□□ -0.85
SLIRP-209ENST00000557342 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.85
SLIRP-209ENST00000557342 GSTZ1O43708 216 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-209ENST00000557342 BRI3O95415 125 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 TRGV3P03979 118 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 PGAM2P15259 253 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 ECI1P42126 302 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 DEFA6Q01524 100 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 DEFB136Q30KP8 78 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 PHLDA2Q53GA4 152 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 OR4A47Q6IF82 309 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 SSX9Q7RTT3 188 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 CCDC190Q86UF4 302 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 SLC25A42Q86VD7 318 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 LHFPL1Q86WI0 220 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 DMBX1Q8NFW5 382 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 OR11H1Q8NG94 326 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 S100ZQ8WXG8 99 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 MS4A10Q96PG2 267 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 GNB4Q9HAV0 340 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 HRASLSQ9HDD0 168 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 AKIP1Q9NQ31 210 aa9.71□□□□□ -0.86
SLIRP-209ENST00000557342 A0A0G2JLM5 398 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 DISC1C4P0D8 188 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 I3L521 148 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 S1PR2O95136 353 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 FGF2P09038 288 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
SLIRP-209ENST00000557342 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 OR9G9P0C7N8 305 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 AKAIN1P0CW23 69 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 IGLL1P15814 213 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 RPL27AP46776 148 aaKnown RBP9.7□□□□□ -0.86
SLIRP-209ENST00000557342 RAB25P57735 213 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 RPL8P62917 257 aaKnown RBP9.7□□□□□ -0.86
SLIRP-209ENST00000557342 BEAN1Q3B7T3 259 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 ASPHD1Q5U4P2 390 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 TBC1D26Q86UD7 250 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 C1QL4Q86Z23 238 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 CADM3Q8N126 398 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 OR1N2Q8NGR9 330 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 TERB2Q8NHR7 220 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 ZFAND1Q8TCF1 268 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 CASTOR1Q8WTX7 329 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 DPF1Q92782 380 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 DUX3Q96PT4 197 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 SOSTQ9BQB4 213 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 COA4Q9NYJ1 87 aa9.7□□□□□ -0.86
SLIRP-209ENST00000557342 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 C13orf42A0A1B0GVH6 325 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 UPK2O00526 184 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 HLA-GP17693 338 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 PTBP1P26599 531 aaKnown RBP eCLIP9.69□□□□□ -0.86
SLIRP-209ENST00000557342 LPAR6P43657 344 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 RND3P61587 244 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF45Q02386 682 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF616Q08AN1 781 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 FHL3Q13643 280 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 SCGB2B2Q4G0G5 96 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 SPANXN2Q5MJ10 180 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 KPRPQ5T749 579 aaPredicted RBP9.69□□□□□ -0.86
SLIRP-209ENST00000557342 OR4D10Q8NGI6 311 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 OR5B12Q96R08 314 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 WDR12Q9GZL7 423 aaKnown RBP9.69□□□□□ -0.86
SLIRP-209ENST00000557342 SLC2A9Q9NRM0 540 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms