RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 FAM71E2Q8N5Q1 922 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 VSTM2AQ8TAG5 236 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 BET1LQ9NYM9 111 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 MBD2Q9UBB5 411 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 CACFD1Q9UGQ2 172 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 SRRM4A7MD48 611 aaKnown RBP19.08■□□□□ 0.65
SIX4-203ENST00000556952 DEDDO75618 318 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 VENTXO95231 258 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 OR9G9P0C7N8 305 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 TMEM65Q6PI78 240 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 FOXRED2Q8IWF2 684 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 DYNAPQ8N1N2 210 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 C17orf50Q8WW18 174 aa19.08■□□□□ 0.65
SIX4-203ENST00000556952 LSM5Q9Y4Y9 91 aaKnown RBP19.08■□□□□ 0.65
SIX4-203ENST00000556952 IL6RP08887 468 aaPredicted RBP19.07■□□□□ 0.64
SIX4-203ENST00000556952 SAA1P0DJI8 122 aaPredicted RBP19.07■□□□□ 0.64
SIX4-203ENST00000556952 IGHV4-38-2P0DP08 117 aa19.07■□□□□ 0.64
SIX4-203ENST00000556952 BPIFB3P59826 476 aa19.07■□□□□ 0.64
SIX4-203ENST00000556952 AARDQ4LEZ3 155 aa19.07■□□□□ 0.64
SIX4-203ENST00000556952 CXorf66Q5JRM2 361 aaPredicted RBP19.07■□□□□ 0.64
SIX4-203ENST00000556952 PUSL1Q8N0Z8 303 aaKnown RBP19.07■□□□□ 0.64
SIX4-203ENST00000556952 OR4A16Q8NH70 328 aa19.07■□□□□ 0.64
SIX4-203ENST00000556952 RNF126Q9BV68 326 aa19.07■□□□□ 0.64
SIX4-203ENST00000556952 H0YIZ8 118 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 AVPP01185 164 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 UBE2KP61086 200 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 RELBQ01201 579 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 VMA21Q3ZAQ7 101 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 RUSC1-AS1Q66K80 236 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 OR4A5Q8NH83 315 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 GRPEL2Q8TAA5 225 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 TSNAXQ99598 290 aaKnown RBP19.06■□□□□ 0.64
SIX4-203ENST00000556952 RCL1Q9Y2P8 373 aaKnown RBP19.06■□□□□ 0.64
SIX4-203ENST00000556952 WRBO00258 174 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 RBMXL2O75526 392 aaKnown RBP19.06■□□□□ 0.64
SIX4-203ENST00000556952 IGLV2-23P01705 113 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 BRS3P32247 399 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 KLF17Q5JT82 389 aaPredicted RBP19.06■□□□□ 0.64
SIX4-203ENST00000556952 ZNF546Q86UE3 836 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 ZNF429Q86V71 674 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 OR5AC2Q9NZP5 309 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 HSPB7Q9UBY9 170 aa19.06■□□□□ 0.64
SIX4-203ENST00000556952 IGHV3OR16-10A0A075B7F0 116 aa19.05■□□□□ 0.64
SIX4-203ENST00000556952 C15orf61A6NNL5 157 aa19.05■□□□□ 0.64
SIX4-203ENST00000556952 E5RGE8 158 aa19.05■□□□□ 0.64
SIX4-203ENST00000556952 KBTBD11O94819 623 aa19.05■□□□□ 0.64
SIX4-203ENST00000556952 PVALBP20472 110 aaPredicted RBP19.05■□□□□ 0.64
SIX4-203ENST00000556952 DCUN1D4Q92564 292 aa19.05■□□□□ 0.64
SIX4-203ENST00000556952 RBMXL1Q96E39 390 aaKnown RBP19.05■□□□□ 0.64
SIX4-203ENST00000556952 NSG2Q9Y328 171 aa19.05■□□□□ 0.64
SIX4-203ENST00000556952 UPK2O00526 184 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 ARPC5O15511 151 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 MED6O75586 246 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 SPDEFO95238 335 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 MOSP00540 346 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 IGKV1D-33P01593 117 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 IGKV1-33P01594 117 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 FGF2P09038 288 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 POLR2GP62487 172 aaKnown RBP eCLIP19.04■□□□□ 0.64
SIX4-203ENST00000556952 TNFRSF9Q07011 255 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 BRD3OSQ6XYD6 125 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 OR2T10Q8NGZ9 312 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 OR52E5Q8NH55 327 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 PRNDQ9UKY0 176 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 TNFSF18Q9UNG2 199 aa19.04■□□□□ 0.64
SIX4-203ENST00000556952 FOXA2Q9Y261 457 aaPredicted RBP19.04■□□□□ 0.64
SIX4-203ENST00000556952 SSSCA1O60232 199 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 NXPH3O95157 252 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 OR2B8PP59922 312 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 EBI3Q14213 229 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 IL17RELQ6ZVW7 336 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 C9orf62Q8N4C0 152 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 TEX45Q8NA69 505 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 TMEM167AQ8TBQ9 72 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 TMEM14BQ9NUH8 114 aa19.03■□□□□ 0.64
SIX4-203ENST00000556952 MXRA5Q9NR99 2828 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 TRAV3A0A0B4J244 114 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 SYNGR2O43760 224 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 SNRNP70P08621 437 aaKnown RBP19.02■□□□□ 0.64
SIX4-203ENST00000556952 PAX6P26367 422 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 PDLIM3Q53GG5 364 aaPredicted RBP19.02■□□□□ 0.64
SIX4-203ENST00000556952 THNSL2Q86YJ6 484 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 RITA1Q96K30 269 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 RAB40CQ96S21 281 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 QTRT1Q9BXR0 403 aaKnown RBP19.02■□□□□ 0.64
SIX4-203ENST00000556952 MAGT1Q9H0U3 335 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 MEGF9Q9H1U4 602 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 FKBP11Q9NYL4 201 aa19.02■□□□□ 0.64
SIX4-203ENST00000556952 SLC25A17O43808 307 aa19.02■□□□□ 0.63
SIX4-203ENST00000556952 DYNLT3P51808 116 aa19.02■□□□□ 0.63
SIX4-203ENST00000556952 INO80EQ8NBZ0 244 aaPredicted RBP19.02■□□□□ 0.63
SIX4-203ENST00000556952 EAF1Q96JC9 268 aaPredicted RBP19.02■□□□□ 0.63
SIX4-203ENST00000556952 C11orf1Q9H5F2 150 aa19.02■□□□□ 0.63
SIX4-203ENST00000556952 ZNF257Q9Y2Q1 563 aa19.02■□□□□ 0.63
SIX4-203ENST00000556952 A0A0U1RQK1 487 aa19.01■□□□□ 0.63
SIX4-203ENST00000556952 L7N2F9 121 aa19.01■□□□□ 0.63
SIX4-203ENST00000556952 FSHBP01225 129 aa19.01■□□□□ 0.63
SIX4-203ENST00000556952 FAM106CPP0CH98 169 aa19.01■□□□□ 0.63
SIX4-203ENST00000556952 NUP62P37198 522 aaPredicted RBP19.01■□□□□ 0.63
SIX4-203ENST00000556952 SPCS3P61009 180 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms