RNA–Protein interactions for RNA: ENST00000556726.5

CCDC88C-211, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5

Gene CCDC88C, Length 3,617 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-211ENST00000556726 RPL29P47914 159 aaKnown RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 ASPHD1Q5U4P2 390 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 FAM90A2PQ658T7 463 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 ANKHD1Q8IWZ3 2542 aaKnown RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 IGHV2OR16-5A0A0B4J2B6 119 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 REG1AP05451 166 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 IER3P46695 156 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 KRTDAPP60985 99 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 SUMO1P63165 101 aaKnown RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 NRN1LQ496H8 165 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 DUX4L9Q6RFH8 374 aaPredicted RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 OR4X1Q8NH49 305 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 CA5BP1Q8WTZ4 195 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 SMDT1Q9H4I9 107 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 CALYQ9NYX4 217 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 ANKRD11Q6UB99 2663 aaPredicted RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 FAM157AC9JC47 383 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 FCN1O00602 326 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 HOXA6P31267 233 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 KIR2DL2P43627 348 aaPredicted RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 TMEM18Q96B42 140 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 TCF19Q9Y242 345 aa10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 MRPS18CQ9Y3D5 142 aaKnown RBP10.14□□□□□ -0.79
CCDC88C-211ENST00000556726 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 TMEM210A6NLX4 147 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 J3QR06 171 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 SLC31A2O15432 143 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 KBTBD11O94819 623 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 OR5I1Q13606 314 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 Q6ZR03 302 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 DCAF16Q9NXF7 216 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 B4DEV8 164 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 OPRK1P41145 380 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 ATP6V1FQ16864 119 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 CD177Q8N6Q3 437 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 OR4S2Q8NH73 311 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 IFNL4K9M1U5 179 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 ORM2P19652 201 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 CBLN1P23435 193 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 CD81P60033 236 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 MOB3BQ86TA1 216 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 MDS2Q8NDY4 140 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
CCDC88C-211ENST00000556726 PRR33A8MZF0 331 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 MGST3O14880 152 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 SPATA31B1PQ5VZV4 182 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 OR6C3Q9NZP0 311 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 NAT8BQ9UHF3 227 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 TRAV34A0A0B4J273 112 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 A0A1B0GV90 55 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 IQCF6A8MYZ5 107 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 CHRNB4P30926 498 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 MLANAQ16655 118 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 RTL8BQ17RB0 113 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 DOLPP1Q86YN1 238 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 OR10G8Q8NGN5 311 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 PITPNC1Q9UKF7 332 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 IGHV1-18A0A0C4DH31 117 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 HPRT1P00492 218 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 APOA2P02652 100 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 ADH4P08319 380 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 COX7A1P24310 79 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 OR10J1P30954 320 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 CAMPP49913 170 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 TIGITQ495A1 244 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 SLC35E4Q6ICL7 350 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 C1QL4Q86Z23 238 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 SLC24A4Q8NFF2 622 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 MISP3Q96FF7 219 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 NCKAP5O14513 1909 aa10.12□□□□□ -0.79
CCDC88C-211ENST00000556726 CACNA1AO00555 2505 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 RAB29O14966 203 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 HRASP01112 189 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 IGFBP2P18065 325 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 DAZAP2Q15038 168 aaPredicted RBP10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 HCP5Q6MZN7 132 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 ODF3L1Q8IXM7 274 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 HARBI1Q96MB7 349 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 VSTM5A8MXK1 200 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 CGAP01215 116 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 FOLR2P14207 255 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 WT1P19544 449 aaPredicted RBP10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 CRYBB3P26998 211 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 ZNF146Q15072 292 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 SPRNQ5BIV9 151 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 TEPPQ6URK8 271 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 DPPA3Q6W0C5 159 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 OR1P1Q8NH06 330 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 SLC35E1Q96K37 410 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 RNF7Q9UBF6 113 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 OR51B2Q9Y5P1 312 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 PRRG2O14669 202 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 CA2P00918 260 aa10.11□□□□□ -0.79
CCDC88C-211ENST00000556726 RNF224P0DH78 156 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms