RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 OR52W1Q6IF63 320 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 Q6ZR03 302 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 MRPL21Q7Z2W9 205 aaKnown RBP3.22□□□□□ -1.89
ATXN3-240ENST00000556339 LINC00596Q86U02 117 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 COMMD2Q86X83 199 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SAXO1Q8IYX7 474 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SCCPDHQ8NBX0 429 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM104Q8NE00 496 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 OR10AD1Q8NGE0 317 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 OR4A4PQ8NGN8 299 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 TMED6Q8WW62 240 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 IL22RA2Q969J5 263 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 APOBEC3DQ96AK3 386 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-240ENST00000556339 GNPNAT1Q96EK6 184 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-240ENST00000556339 URB1-AS1Q96HZ7 61 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ARHGAP5-AS1Q96IT6 56 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SULT4A1Q9BR01 284 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PCGF1Q9BSM1 259 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SLC25A31Q9H0C2 315 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 TLNRD1Q9H1K6 362 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 KCNK15Q9H427 330 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 OPA3Q9H6K4 179 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 NAA60Q9H7X0 242 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FN3KRPQ9HA64 309 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF286AQ9HBT8 521 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ESM1Q9NQ30 184 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PLEKHJ1Q9NW61 149 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 DCAF16Q9NXF7 216 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 COA4Q9NYJ1 87 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CLN8Q9UBY8 286 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SLC7A11Q9UPY5 501 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FAM96BQ9Y3D0 163 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 INSIG2Q9Y5U4 225 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CUBNO60494 3623 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PKD1L1Q8TDX9 2849 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 TANC2Q9HCD6 1990 aa3.21□□□□□ -1.89
ATXN3-240ENST00000556339 A0A087WWC5 75 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TRAV38-1A0A0B4J264 116 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TRAV40A0A0B4J280 105 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 IGHV2-70DA0A0C4DH43 119 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 KIR2DS1A0A191URI9 304 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MEX3AA1L020 520 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 B4DEV8 164 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 M0R135 149 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 GPR31O00270 319 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 UBE2CO00762 179 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ADAM20O43506 726 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 XRCC2O43543 280 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ENSAO43768 121 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MED6O75586 246 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 DIRAS3O95661 229 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 HBE1P02100 147 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SFTA3P0C7M3 94 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF728P0DKX0 622 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 IGHV4-38-2P0DP08 117 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SLC2A1P11166 492 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MUC1P15941 1255 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RCC1P18754 421 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 FUT3P21217 361 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 CA6P23280 308 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 GLRA1P23415 457 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SNCAP37840 140 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 OR3A4PP47883 348 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RBP2P50120 134 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MEOX2P50222 304 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MTCP1P56278 107 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 FGF12P61328 243 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 DEFA6Q01524 100 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 PMS2P11Q13670 270 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM187Q14656 261 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ATXN7L3Q14CW9 347 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SLC9A3R2Q15599 337 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 DEFB112Q30KQ8 113 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SLC22A6Q4U2R8 563 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ABCA11PQ4W5N1 156 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 FAM201AQ5SY85 155 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 GGNBP1Q5YKI7 109 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RPL7L1Q6DKI1 246 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 FBXW12Q6X9E4 464 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 KIR3DL3Q8N743 410 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 OR10G4Q8NGN3 311 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 OR4F5Q8NH21 305 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TCTEX1D2Q8WW35 142 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RTN4IP1Q8WWV3 396 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MOB3AQ96BX8 217 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RBMXL1Q96E39 390 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RRNAD1Q96FB5 475 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF799Q96GE5 643 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 FAM71F1Q96KD3 344 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 OR10C1Q96KK4 312 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM56Q96MV1 263 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF2Q9BSG1 426 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 NICN1Q9BSH3 213 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms