RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 PFDN1O60925 122 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 APOA2P02652 100 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CTXN2P0C2S0 81 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CT45A6P0DMU7 189 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CT45A5P0DMU8 189 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CT45A7P0DMV0 189 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 DTYMKP23919 212 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 HLA-DMAP28067 261 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 FCGR2CP31995 323 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CBX5P45973 191 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 RFX2P48378 723 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 TMBIM6P55061 237 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 TAS2R20P59543 309 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 ACTBP60709 375 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 HERV-K104P61576 105 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 SLC35B1P78383 322 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 SPCS2Q15005 226 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CTF1Q16619 201 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 CNIH2Q6PI25 160 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 FOXRED2Q8IWF2 684 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 ODF3L1Q8IXM7 274 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 C8orf31Q8N9H6 132 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 OR5H2Q8NGV7 314 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 SGMS2Q8NHU3 365 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 FCAMRQ8WWV6 532 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 BORCS5Q969J3 196 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 ST6GALNAC6Q969X2 333 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 FLYWCH2Q96CP2 140 aaKnown RBP3.67□□□□□ -1.82
ATXN3-238ENST00000556288 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 DIRAS2Q96HU8 199 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 NABP2Q9BQ15 211 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 C6orf62Q9GZU0 229 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-238ENST00000556288 SLC5A7Q9GZV3 580 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 FBXL15Q9H469 300 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 RANBP3Q9H6Z4 567 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-238ENST00000556288 PARP11Q9NR21 331 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 SLC35D1Q9NTN3 355 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 NECAP2Q9NVZ3 263 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 METTL1Q9UBP6 276 aaKnown RBP3.67□□□□□ -1.82
ATXN3-238ENST00000556288 EXTL2Q9UBQ6 330 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 ANXA10Q9UJ72 324 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 WASHC3Q9Y3C0 194 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 MMP24Q9Y5R2 645 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 WSB1Q9Y6I7 421 aa3.67□□□□□ -1.82
ATXN3-238ENST00000556288 ANK3Q12955 4377 aaKnown RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 A0A0A6YYH2 397 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 A6NJ64 397 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 CTDSP2O14595 271 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 NBR2O15453 112 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 FCGR3BO75015 233 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 RBBP9O75884 186 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 CRYZL1O95825 349 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 APOA1P02647 267 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 IFNA6P05013 189 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 APELAP0DMC3 54 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 OR5H8P0DN80 308 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 RPA2P15927 270 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 VDAC1P21796 283 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 AADACP22760 399 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 HOXD3P31249 432 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 THBS3P49746 956 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 RAB25P57735 213 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 IL18Q14116 193 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 CDK10Q15131 360 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 RTL8BQ17RB0 113 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 LY6G6FQ5SQ64 297 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 C11orf88Q6PI97 169 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 C10orf99Q6UWK7 81 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 ZNF833PQ6ZTB9 187 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 TMEM17Q86X19 198 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 HOGA1Q86XE5 327 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 H1FOOQ8IZA3 346 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 C5orf56Q8N8D9 126 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 OR5AP2Q8NGF4 316 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 OR4X2Q8NGF9 303 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 OR6F1Q8NGZ6 308 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 MCFD2Q8NI22 146 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 RAB2BQ8WUD1 216 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 CHPT1Q8WUD6 406 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 TCTEX1D2Q8WW35 142 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 TMEM18Q96B42 140 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 MS4A10Q96PG2 267 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 TSNAXQ99598 290 aaKnown RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 PHB2Q99623 299 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 CITED2Q99967 270 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 ZNF2Q9BSG1 426 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 ABCG5Q9H222 651 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 IFI27L2Q9H2X8 130 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 GHITMQ9H3K2 345 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 CCL28Q9NRJ3 127 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 SDHAF2Q9NX18 166 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 TAS2R8Q9NYW2 309 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 ZNF107Q9UII5 783 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-238ENST00000556288 PRELID3BQ9Y3B1 194 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 OR2W1Q9Y3N9 320 aa3.66□□□□□ -1.82
ATXN3-238ENST00000556288 IGKV1D-13A0A0B4J2D9 117 aa3.65□□□□□ -1.83
ATXN3-238ENST00000556288 OR5H14A6NHG9 310 aa3.65□□□□□ -1.83
ATXN3-238ENST00000556288 H0YJW9 148 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms