RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GLYATL2Q8WU03 294 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 RBPMSQ93062 196 aaKnown RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 IL22RA2Q969J5 263 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 TP53RKQ96S44 253 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 C19orf24Q9BVV8 132 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 ALX4Q9H161 411 aaPredicted RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 C20orf85Q9H1P6 137 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 OR51J1Q9H342 316 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 ZNF702PQ9H963 129 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 TMEM140Q9NV12 185 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 NUDT15Q9NV35 164 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 FKBP11Q9NYL4 201 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 BET1LQ9NYM9 111 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 CACFD1Q9UGQ2 172 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 RNF114Q9Y508 228 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 TRAV6A0A075B6T7 132 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 UPK2O00526 184 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 RBMXL2O75526 392 aaKnown RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 KBTBD11O94819 623 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 SFT2D2O95562 160 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 PTTG1O95997 202 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 DHFRP00374 187 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 CA2P00918 260 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 HLA-AP01891 365 aaKnown RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 CRYGBP07316 175 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 FGF2P09038 288 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 VDAC1P21796 283 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 G6PCP35575 357 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 GNB1P62873 340 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 RPL8P62917 257 aaKnown RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 SLC35B1P78383 322 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 CX3CL1P78423 397 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 RELBQ01201 579 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 PPP1R1AQ13522 171 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 FXYD3Q14802 87 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 TNXAQ16473 311 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 PRSS8Q16651 343 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 TMEM268Q5VZI3 342 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 NRARPQ7Z6K4 114 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 LYG2Q86SG7 212 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 MRPL41Q8IXM3 137 aaKnown RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 VKORC1L1Q8N0U8 176 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 PUSL1Q8N0Z8 303 aaKnown RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 DUSP18Q8NEJ0 188 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 LINC01006Q8NI28 216 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 CASTOR1Q8WTX7 329 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 CHPT1Q8WUD6 406 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 ARPC1AQ92747 370 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 TMEM230Q96A57 120 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 TMEM68Q96MH6 324 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 TMEM56Q96MV1 263 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 CLCC1Q96S66 551 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 SPIN2AQ99865 258 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 SPIN2BQ9BPZ2 258 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 COMMD5Q9GZQ3 224 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 ZNF430Q9H8G1 570 aaPredicted RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 GPN1Q9HCN4 374 aaPredicted RBP6.05□□□□□ -1.44
TDP1-214ENST00000556063 PARP11Q9NR21 331 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 ZNF580Q9UK33 172 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 PRNDQ9UKY0 176 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 FLVCR2Q9UPI3 526 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 TMEM56-RWDD3S4R434 201 aa6.05□□□□□ -1.44
TDP1-214ENST00000556063 IGHV7-81A0A0B4J1V7 117 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 A0A0B4J2A0 478 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 C9orf170A2RU37 121 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 SH2D7A6NKC9 451 aaPredicted RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 INMT-MINDY4F8WBC2 141 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 FCN1O00602 326 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 PRAF2O60831 178 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 DUS4LO95620 317 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 IGF1P05019 195 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 OR4E1P0C645 316 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 HLA-GP17693 338 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 ANXA7P20073 488 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 MDKP21741 143 aaPredicted RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 RPL27AP46776 148 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 SUPT4H1P63272 117 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 DHRS2Q13268 280 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 TMEM187Q14656 261 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 RGS21Q2M5E4 152 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 KRTAP21-3Q3LHN1 58 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 THOC7Q6I9Y2 204 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 C12orf54Q6X4T0 127 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 HSD17B13Q7Z5P4 300 aaPredicted RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 CENPVQ7Z7K6 275 aaPredicted RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 COMMD1Q8N668 190 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 OR4A16Q8NH70 328 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 GRPEL2Q8TAA5 225 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 LSM10Q969L4 123 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 RBMXL1Q96E39 390 aaKnown RBP6.04□□□□□ -1.44
TDP1-214ENST00000556063 SEC22AQ96IW7 307 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 PHB2Q99623 299 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 HSPB9Q9BQS6 159 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 PDCD10Q9BUL8 212 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 TPSG1Q9NRR2 321 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 SHPKQ9UHJ6 478 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 COL6A5A8TX70 2615 aa6.04□□□□□ -1.44
TDP1-214ENST00000556063 TRAV41A0A0B4J266 112 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 PSMB11A5LHX3 300 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms