RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 AHRRA9YTQ3 701 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 P04436 131 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 OR9G9P0C7N8 305 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 PSG1P11464 419 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF83P51522 516 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 SELENOVP59797 346 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 CENPWQ5EE01 88 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 BORCS7Q96B45 105 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 PHF7Q9BWX1 381 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-217ENST00000555022 PROK2Q9HC23 129 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 IL36GQ9NZH8 169 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 LRP4O75096 1905 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 ATMQ13315 3056 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 hDV102S1A0JD36 115 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LRP5LA4QPB2 252 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LRRC30A6NM36 301 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 PSPNO60542 156 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LINC00614P0C842 121 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 GLB1P16278 677 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 TMEM11P17152 192 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 CD1BP29016 333 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 UQCRFS1P47985 274 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF137PP52743 207 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 DSCR4P56555 118 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-217ENST00000555022 PSG5Q15238 335 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 UTF1Q5T230 341 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LYSMD4Q5XG99 296 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 FBXW9Q5XUX1 488 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 TMEM14EPQ6UXP3 125 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 FADS6Q8N9I5 356 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 DMXL2Q8TDJ6 3036 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 TANC2Q9HCD6 1990 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 SMG1Q96Q15 3661 aaKnown RBP7.42□□□□□ -1.22
SYNE2-217ENST00000555022 DPRXA6NFQ7 191 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 CSN3P07498 182 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 NXPH1P58417 271 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 RPL8P62917 257 aaKnown RBP7.42□□□□□ -1.22
SYNE2-217ENST00000555022 MLANAQ16655 118 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 RPEL1Q2QD12 228 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 CEACAM21Q3KPI0 293 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 TRAT1Q6PIZ9 186 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 ASCL4Q6XD76 172 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LINC00696Q6ZRV3 163 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LINC00173Q6ZV60 143 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 MIR17HGQ75NE6 70 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 S100A7AQ86SG5 101 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 OIT3Q8WWZ8 545 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 FAM168AQ92567 244 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 HSD17B10Q99714 261 aaKnown RBP7.42□□□□□ -1.22
SYNE2-217ENST00000555022 C20orf144Q9BQM9 153 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-217ENST00000555022 A0A1W2PS18 150 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 OR2T8A6NH00 312 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF716A6NP11 495 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 YPEL1O60688 119 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 PPOXP50336 477 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF138P52744 262 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 RAC1P63000 192 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 PCOLCEQ15113 449 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 LPAL2Q16609 132 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 RPL39P5Q59GN2 51 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 SLC25A53Q5H9E4 307 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 TMEM144Q7Z5S9 345 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 GMPPAQ96IJ6 420 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-217ENST00000555022 YPEL2Q96QA6 119 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 CLEC7AQ9BXN2 247 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF891A8MT65 544 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-217ENST00000555022 C12orf77C9JDV5 145 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 HSBP1O75506 76 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 NEURL1O76050 574 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 VAMP5O95183 116 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 CFIP05156 583 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 GPX1P07203 203 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 CTXN2P0C2S0 81 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 IGLC2P0DOY2 106 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 ATP6V1FQ16864 119 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 MPV17L2Q567V2 206 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 C1orf174Q8IYL3 243 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 OR2M7Q8NG81 312 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 PLEKHA3Q9HB20 300 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 OBP2BQ9NPH6 170 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 UQCR10Q9UDW1 63 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 CNOT1A5YKK6 2376 aaKnown RBP7.41□□□□□ -1.22
SYNE2-217ENST00000555022 PCNX1Q96RV3 2341 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 LOC105371242A0A075B767 164 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 IGHV5-10-1A0A0J9YXX1 117 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 M0R2Z0 102 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 MLNRO43193 412 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 APELAP0DMC3 54 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 GNG4P50150 75 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 RAC3P60763 192 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 RANP62826 216 aaKnown RBP7.41□□□□□ -1.22
SYNE2-217ENST00000555022 OR4A47Q6IF82 309 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 WDR74Q6RFH5 385 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-217ENST00000555022 GCNT2Q8N0V5 402 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 C10orf35Q96D05 121 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 SLC35D1Q9NTN3 355 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 KCNIP1Q9NZI2 227 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms