RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 PAM16Q9Y3D7 125 aa11.15□□□□□ -0.62
SIX1-203ENST00000554986 OR2W1Q9Y3N9 320 aa11.15□□□□□ -0.62
SIX1-203ENST00000554986 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
SIX1-203ENST00000554986 HELZ2Q9BYK8 2649 aaKnown RBP11.14□□□□□ -0.63
SIX1-203ENST00000554986 ZNF816-ZNF321PA0A0X1KG74 233 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 NPIPB11E5RHQ5 1161 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 CGAP01215 116 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 IAPPP10997 89 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 PSG2P11465 335 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 COX5AP20674 150 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 NPPCP23582 126 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 OR10G9Q8NGN4 311 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 OR10G7Q8NGN6 311 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 OR1F12Q8NHA8 337 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 TMEM147Q9BVK8 224 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 SFXN3Q9BWM7 321 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 UQCR10Q9UDW1 63 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 A0A1W2PN81 502 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 C11orf94C9JXX5 98 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 PAGE4O60829 102 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 IGKV1-39P01597 117 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 IGKV1D-39P04432 117 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 FGF12P61328 243 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 ITLN2Q8WWU7 325 aaPredicted RBP11.14□□□□□ -0.63
SIX1-203ENST00000554986 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
SIX1-203ENST00000554986 GPHA2Q96T91 129 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 KCNIP2Q9NS61 270 aa11.14□□□□□ -0.63
SIX1-203ENST00000554986 ADGRG4Q8IZF6 3080 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 NDUFB8O95169 186 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 CRISP2P16562 243 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 PLCXD3Q63HM9 321 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 AAED1Q7RTV5 226 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 OR10V1Q8NGI7 309 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 SGMS2Q8NHU3 365 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
SIX1-203ENST00000554986 TMEM45BQ96B21 275 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
SIX1-203ENST00000554986 RBM24Q9BX46 236 aaKnown RBP11.13□□□□□ -0.63
SIX1-203ENST00000554986 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
SIX1-203ENST00000554986 SAA2-SAA4A0A096LPE2 208 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 TRBV9A0A0B4J1U6 114 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 DEGS1O15121 323 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 MRPL33O75394 65 aaKnown RBP11.12□□□□□ -0.63
SIX1-203ENST00000554986 SERF1AO75920 110 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 IGKV1-5P01602 117 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 IGHV3-9P01782 118 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 REG1AP05451 166 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 CDKN1AP38936 164 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 PDCD1Q15116 288 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 BATFQ16520 125 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 MORN2Q502X0 79 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 Q8N976 141 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 GATAD1Q8WUU5 269 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 RAB1CQ92928 201 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 PLSCR4Q9NRQ2 329 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 CCL25O15444 150 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 TNFSF12O43508 249 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 AGFG2O95081 481 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 TFPI2P48307 235 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 GNB1P62873 340 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 VWC2Q2TAL6 325 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 SPSB4Q96A44 273 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 ULBP2Q9BZM5 246 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 PROCRQ9UNN8 238 aa11.12□□□□□ -0.63
SIX1-203ENST00000554986 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
SIX1-203ENST00000554986 MDFIC2A0A1B0GVS7 189 aa11.11□□□□□ -0.63
SIX1-203ENST00000554986 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
SIX1-203ENST00000554986 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
SIX1-203ENST00000554986 FFAR4Q5NUL3 377 aa11.11□□□□□ -0.63
SIX1-203ENST00000554986 ZNF474Q6S9Z5 364 aaPredicted RBP11.11□□□□□ -0.63
SIX1-203ENST00000554986 APH1AQ96BI3 265 aa11.11□□□□□ -0.63
SIX1-203ENST00000554986 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
SIX1-203ENST00000554986 LIN7CQ9NUP9 197 aaKnown RBP11.11□□□□□ -0.63
SIX1-203ENST00000554986 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
SIX1-203ENST00000554986 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
SIX1-203ENST00000554986 OR5G3P0C626 314 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 IGLC2P0DOY2 106 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
SIX1-203ENST00000554986 MMDQ15546 238 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 ZNF808Q8N4W9 903 aaPredicted RBP11.1□□□□□ -0.63
SIX1-203ENST00000554986 STPG4Q8N801 248 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 OR51H1Q8NH63 302 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 MRGPRDQ8TDS7 321 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
SIX1-203ENST00000554986 MRPS16Q9Y3D3 137 aaKnown RBP11.1□□□□□ -0.63
SIX1-203ENST00000554986 DOPEY1Q5JWR5 2465 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms