RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 LILRB2Q8N423 598 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 DEFB108BQ8NET1 73 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 EDARADDQ8WWZ3 215 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 RAB1CQ92928 201 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 TIMD4Q96H15 378 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 PPIAL4AQ9Y536 164 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 IGHV3OR15-7A0A075B7D8 119 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 CXorf65A6NEN9 183 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 B4DEV8 164 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 FSTL3O95633 263 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 GABRA2P47869 451 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 LMO4P61968 165 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 CR1LQ2VPA4 569 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 TEX36Q5VZQ5 186 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 SLC35E3Q7Z769 313 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 P2RX4Q99571 388 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 WDR61Q9GZS3 305 aaKnown RBP14.25□□□□□ -0.13
SHOX-204ENST00000554971 FAM90A9PA6NNJ1 464 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 H3BP45 60 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 TNFRSF13BO14836 293 aaPredicted RBP14.24□□□□□ -0.13
SHOX-204ENST00000554971 TFF1P04155 84 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 METTL15P1P0C7V9 234 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 USF1P22415 310 aaPredicted RBP14.24□□□□□ -0.13
SHOX-204ENST00000554971 COL10A1Q03692 680 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 AKIRIN2Q53H80 203 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 RAB9BQ9NP90 201 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 SIRT7Q9NRC8 400 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 DSCAML1Q8TD84 2053 aa14.24□□□□□ -0.13
SHOX-204ENST00000554971 LOC102723971A0A1B0GUV8 181 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 H3BQ15 152 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 FCN3O75636 299 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 IAPPP10997 89 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 RAB5AP20339 215 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 TAGLN2P37802 199 aaKnown RBP14.23□□□□□ -0.13
SHOX-204ENST00000554971 LOXL1Q08397 574 aaPredicted RBP14.23□□□□□ -0.13
SHOX-204ENST00000554971 HABP2Q14520 560 aaPredicted RBP14.23□□□□□ -0.13
SHOX-204ENST00000554971 IZUMO4Q1ZYL8 232 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 C1QL4Q86Z23 238 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 OR52L2PQ8NGH6 319 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 RPRMQ9NS64 109 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 RFNGQ9Y644 331 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 HIVEP2P31629 2446 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 MBP02144 154 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 PRDX2P32119 198 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 CEBPDP49716 269 aaPredicted RBP14.23□□□□□ -0.13
SHOX-204ENST00000554971 HAGHQ16775 308 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 TMEM155Q4W5P6 130 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 TMEM41BQ5BJD5 291 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 SPANXN5Q5MJ07 72 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 DUX4L9Q6RFH8 374 aaPredicted RBP14.23□□□□□ -0.13
SHOX-204ENST00000554971 LYPD2Q6UXB3 125 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 ETV3LQ6ZN32 361 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 HAPLN4Q86UW8 402 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 TVP23CQ96ET8 276 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 SNX22Q96L94 193 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 NIPSNAP3BQ9BS92 247 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 TMUB1Q9BVT8 246 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 RBKSQ9H477 322 aa14.23□□□□□ -0.13
SHOX-204ENST00000554971 PUS1Q9Y606 427 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHOX-204ENST00000554971 MGST3O14880 152 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 SOX15O60248 233 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 IFNA1P01562 189 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 IGHV2-5P01817 119 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 SLC38A11Q08AI6 406 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 ARL16Q0P5N6 197 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 PNRC1Q12796 327 aaPredicted RBP14.22□□□□□ -0.13
SHOX-204ENST00000554971 STUMQ69YW2 141 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 ZNF429Q86V71 674 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 MRGPRDQ8TDS7 321 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 TAF15Q92804 592 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHOX-204ENST00000554971 OR4C12Q96R67 309 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 JPT1Q9UK76 154 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 KIAA2026Q5HYC2 2103 aa14.22□□□□□ -0.13
SHOX-204ENST00000554971 IGKV1D-17A0A075B6S4 117 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 A0A1B0GV50 99 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 SMAD7O15105 426 aaKnown RBP14.21□□□□□ -0.13
SHOX-204ENST00000554971 GYPAP02724 150 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 AARDQ4LEZ3 155 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 UBALD1Q8TB05 177 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 TCTEX1D2Q8WW35 142 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 TMEM147Q9BVK8 224 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 CTSZQ9UBR2 303 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 GAB2Q9UQC2 676 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 NF1P21359 2839 aa14.21□□□□□ -0.13
SHOX-204ENST00000554971 TRAV38-1A0A0B4J264 116 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 C15orf65H3BRN8 121 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 ITGB1BP1O14713 200 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 ZNF737O75373 536 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 OR2C1O95371 312 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 BCL2P10415 239 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 AKR1C3P42330 323 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 GLIPR1P48060 266 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 RPL30P62888 115 aaKnown RBP14.21□□□□□ -0.14
SHOX-204ENST00000554971 H2BFWTQ7Z2G1 175 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 AGMATQ9BSE5 352 aa14.21□□□□□ -0.14
SHOX-204ENST00000554971 ODAMA1E959 279 aa14.2□□□□□ -0.14
SHOX-204ENST00000554971 RBFOX2O43251 390 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHOX-204ENST00000554971 YPEL1O60688 119 aa14.2□□□□□ -0.14
SHOX-204ENST00000554971 RAMP3O60896 148 aa14.2□□□□□ -0.14
SHOX-204ENST00000554971 KRASP01116 189 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms