RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ANKRD20A5PA0PJZ0 165 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 HMX3A6NHT5 357 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 MSGN1A6NI15 193 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 KBTBD11O94819 623 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 IFNA6P05013 189 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 KIR2DS2P43631 304 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 LPAR6P43657 344 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 RAB9AP51151 201 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 UCP3P55916 312 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 MRPS10P82664 201 aaKnown RBP9.6□□□□□ -0.87
SYNE2-214ENST00000554928 CATR1Q13166 79 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 AKIRIN2Q53H80 203 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 TBC1D26Q86UD7 250 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF491Q8N8L2 437 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 TMEM167AQ8TBQ9 72 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 SRSF12Q8WXF0 261 aaKnown RBP9.6□□□□□ -0.87
SYNE2-214ENST00000554928 TRIM63Q969Q1 353 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 TNCP24821 2201 aa9.6□□□□□ -0.87
SYNE2-214ENST00000554928 MEGF8Q7Z7M0 2845 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 CGB1A6NKQ9 187 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 RBFOX2O43251 390 aaKnown RBP eCLIP9.59□□□□□ -0.87
SYNE2-214ENST00000554928 OR2A4O95047 310 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 IGKV1-39P01597 117 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 PF4P02776 101 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 PRH1P02810 166 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 IGKV1D-39P04432 117 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 IL6RP08887 468 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-214ENST00000554928 PGAM2P15259 253 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 TBPP20226 339 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 F2RP25116 425 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 CDX1P47902 265 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-214ENST00000554928 SCGB2B2Q4G0G5 96 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 SLC38A6Q8IZM9 456 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 ARRDC1Q8N5I2 433 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 LINC00482Q8N8I6 264 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 OR6Q1Q8NGQ2 317 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 OR13C8Q8NGS7 320 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 MARCH1Q8TCQ1 289 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 DGCR14Q96DF8 476 aaKnown RBP9.59□□□□□ -0.87
SYNE2-214ENST00000554928 OR2A7Q96R45 310 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 P2RX4Q99571 388 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 SLC2A9Q9NRM0 540 aa9.59□□□□□ -0.87
SYNE2-214ENST00000554928 TEX22C9J3V5 150 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 I3L521 148 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 HPRT1P00492 218 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 IGLL1P15814 213 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 TAS2R31P59538 309 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 SSBP1Q04837 148 aaKnown RBP9.58□□□□□ -0.88
SYNE2-214ENST00000554928 TMEM267Q0VDI3 215 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-214ENST00000554928 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 PYDC2Q56P42 97 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 TMEM65Q6PI78 240 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 MMD2Q8IY49 270 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 CMTM1Q8IZ96 169 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 WFDC9Q8NEX5 89 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 TERB2Q8NHR7 220 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 THAP7Q9BT49 309 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-214ENST00000554928 PLEKHA2Q9HB19 425 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 TMEM140Q9NV12 185 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 NSG2Q9Y328 171 aa9.58□□□□□ -0.88
SYNE2-214ENST00000554928 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 DBX1A6NMT0 343 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 CCL24O00175 119 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 UPK2O00526 184 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 HRASP01112 189 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 OR9G9P0C7N8 305 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 AKAIN1P0CW23 69 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 AREGP15514 252 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 NQO2P16083 231 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 G6PCP35575 357 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 PIGPP57054 158 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 ZNF45Q02386 682 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 KLF9Q13886 244 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-214ENST00000554928 TCTEX1D1Q8N7M0 179 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 POC5Q8NA72 575 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 ADAD2Q8NCV1 583 aaKnown RBP9.57□□□□□ -0.88
SYNE2-214ENST00000554928 OR51S1Q8NGJ8 323 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 OR5M8Q8NGP6 311 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 C4orf3Q8WVX3 66 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 UBE2E2Q96LR5 201 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 PHB2Q99623 299 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 SDHCQ99643 169 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-214ENST00000554928 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-214ENST00000554928 SRRQ9GZT4 340 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 HRASLSQ9HDD0 168 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 BET1LQ9NYM9 111 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 RABL2AQ9UBK7 228 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-214ENST00000554928 RABL2BQ9UNT1 228 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
SYNE2-214ENST00000554928 MARCH11A6NNE9 402 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 MPPED1O15442 326 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 WIPF1O43516 503 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 KRASP01116 189 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms