RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 PRDX2P32119 198 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF90Q03938 601 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 WDR82Q6UXN9 313 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 MDS2Q8NDY4 140 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 LEAP2Q969E1 77 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 MRPL37Q9BZE1 423 aaKnown RBP7.92□□□□□ -1.14
SYNE2-213ENST00000554805 WDR83OSQ9Y284 106 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 PXMP4Q9Y6I8 212 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 SPTBN1Q01082 2364 aaKnown RBP7.92□□□□□ -1.14
SYNE2-213ENST00000554805 J3QW42 95 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 SLC31A2O15432 143 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 GGCTO75223 188 aaKnown RBP7.92□□□□□ -1.14
SYNE2-213ENST00000554805 IQCJQ1A5X6 159 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 TCF23Q7RTU1 214 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 MISP3Q96FF7 219 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 FKBP11Q9NYL4 201 aa7.92□□□□□ -1.14
SYNE2-213ENST00000554805 COL6A6A6NMZ7 2263 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 RRHO14718 337 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 ACTL6BO94805 426 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 PAX5Q02548 391 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 ACTL10Q5JWF8 245 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 FAM214BQ7L5A3 538 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 LRP11Q86VZ4 500 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 PPP1R35Q8TAP8 253 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 RBM14Q96PK6 669 aaKnown RBP7.91□□□□□ -1.14
SYNE2-213ENST00000554805 SPRY4Q9C004 299 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 COL12A1Q99715 3063 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 HEATR1Q9H583 2144 aaKnown RBP7.91□□□□□ -1.14
SYNE2-213ENST00000554805 ABCA4P78363 2273 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 SPCS3P61009 180 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 HES3Q5TGS1 186 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 VWA1Q6PCB0 445 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 C11orf53Q8IXP5 236 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 ZNF114Q8NC26 417 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 OR10G8Q8NGN5 311 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 NOL4LQ96MY1 436 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-213ENST00000554805 MS4A10Q96PG2 267 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 TRAV3A0A0B4J244 114 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 SCO2A0A1W2PP80 73 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 GRIFINA4D1Z8 144 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 HPRT1P00492 218 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 ADH4P08319 380 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 OR4A8P0C604 315 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 P0C879 139 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 CCKARP32238 428 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 TMEM256Q8N2U0 113 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 TCTEX1D1Q8N7M0 179 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 KCNIP2Q9NS61 270 aa7.91□□□□□ -1.14
SYNE2-213ENST00000554805 CECR9P0C854 216 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 DUTP33316 252 aaKnown RBP7.9□□□□□ -1.14
SYNE2-213ENST00000554805 RAB31Q13636 194 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 SFRP2Q96HF1 295 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 TP53TG5Q9Y2B4 290 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 RELNP78509 3460 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 SPINK4O60575 86 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 Q6ZT83 130 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 CD177Q8N6Q3 437 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 DEFB108BQ8NET1 73 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.14
SYNE2-213ENST00000554805 BTF3L4Q96K17 158 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 IMMP2LQ96T52 175 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 GCM1Q9NP62 436 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 PCSK5Q92824 1860 aa7.9□□□□□ -1.14
SYNE2-213ENST00000554805 PLCE1Q9P212 2302 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 A8MWP6 167 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 CXorf1O96002 111 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 LCN2P80188 198 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 TREML4Q6UXN2 200 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 MRPL52Q86TS9 123 aaKnown RBP7.9□□□□□ -1.15
SYNE2-213ENST00000554805 TGIF2LXQ8IUE1 241 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 ZNRF1Q8ND25 227 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 TMEM140Q9NV12 185 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 TCF19Q9Y242 345 aa7.9□□□□□ -1.15
SYNE2-213ENST00000554805 MAP1AP78559 2803 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-213ENST00000554805 A8MXE2 369 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 SLC17A3O00476 420 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 CD33P20138 364 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 TAS2R60P59551 318 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF705AQ6ZN79 300 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-213ENST00000554805 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 BAGE2Q86Y30 109 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 DMRTC2Q8IXT2 367 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-213ENST00000554805 OR4P4Q8NGL7 312 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 UHRF2Q96PU4 802 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 NDUFAF3Q9BU61 184 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 HES4Q9HCC6 221 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 CBLN4Q9NTU7 201 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF318Q5VUA4 2279 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 RBFOX2O43251 390 aaKnown RBP eCLIP7.89□□□□□ -1.15
SYNE2-213ENST00000554805 SPRY3O43610 288 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 WISP2O76076 250 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 MT-CO2P00403 227 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 CBLN1P23435 193 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 RAB4BP61018 213 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
SYNE2-213ENST00000554805 SPATA31B1PQ5VZV4 182 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 OCC1Q8TAD7 63 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 CMTM2Q8TAZ6 248 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms