RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 MARCH11A6NNE9 402 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 IGKV1-39P01597 117 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 IGKV1D-39P04432 117 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 SERPINE2P07093 398 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 CCR6P51684 374 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 GNB1P62873 340 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 C19orf54Q5BKX5 351 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 ZNF329Q86UD4 541 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 ADAD2Q8NCV1 583 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 SGMS2Q8NHU3 365 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 TMEM230Q96A57 120 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 NAA60Q9H7X0 242 aa16.84■□□□□ 0.29
SDR39U1-208ENST00000554698 TRAV41A0A0B4J266 112 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 TEX13DA0A0J9YY54 714 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 FBXO24O75426 580 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 CNIH1O95406 144 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 KRASP01116 189 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 CD28P10747 220 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 RPA2P15927 270 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 VDAC1P21796 283 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 ERVK-16P61578 105 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 SLC35B1P78383 322 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 RBMS2Q15434 407 aaKnown RBP16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 TCTEX1D4Q5JR98 221 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 DMBX1Q8NFW5 382 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 TMEM140Q9NV12 185 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 NUBP2Q9Y5Y2 271 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 WSB1Q9Y6I7 421 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 DNHD1Q96M86 4753 aa16.83■□□□□ 0.28
SDR39U1-208ENST00000554698 G3V318 75 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 NDUFB6O95139 128 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 FGF2P09038 288 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 UCP1P25874 307 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 G6PCP35575 357 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 SP6Q3SY56 376 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 C11orf44Q8N8P7 122 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 MINDY2Q8NBR6 621 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 GRPEL2Q8TAA5 225 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 SEC22AQ96IW7 307 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 FAM103A1Q9BTL3 118 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 TMEM222Q9H0R3 208 aa16.82■□□□□ 0.28
SDR39U1-208ENST00000554698 UPK2O00526 184 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 LYRM1O43325 122 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 UPK1BO75841 260 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 OR5AC1P0C628 307 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 PPIFP30405 207 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 MAS1LP35410 378 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 RPL8P62917 257 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 TNXAQ16473 311 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 AKIRIN2Q53H80 203 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 SGPP2Q8IWX5 399 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 COMMD1Q8N668 190 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 OR4X2Q8NGF9 303 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 ABHD5Q8WTS1 349 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 GALNT14Q96FL9 552 aa16.81■□□□□ 0.28
SDR39U1-208ENST00000554698 ACTL6BO94805 426 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 IGHG4P01861 327 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 AKR1C4P17516 323 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 SUPT4H1P63272 117 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 CD83Q01151 205 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 TMEM267Q0VDI3 215 aaPredicted RBP16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 TEX38Q6PEX7 206 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 TMED4Q7Z7H5 227 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 GLYATL2Q8WU03 294 aa16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 SRSF12Q8WXF0 261 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-208ENST00000554698 TRAV3A0A0B4J244 114 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 CDS2O95674 445 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 HLA-GP17693 338 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 DHODHQ02127 395 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 FOXE3Q13461 319 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 ECSCRQ19T08 205 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 TRIM16LQ309B1 348 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 C10orf55Q5SWW7 151 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 RNF152Q8N8N0 203 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 LFNGQ8NES3 379 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 TBC1D24Q9ULP9 559 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 PLXNB1O43157 2135 aa16.79■□□□□ 0.28
SDR39U1-208ENST00000554698 MSGN1A6NI15 193 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 IGLV1-40P01703 118 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 IFITM3Q01628 133 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 ASAH1Q13510 395 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 TMEM128Q5BJH2 165 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 HIST2H2BDQ6DRA6 164 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 UNQ5815/PRO19632Q6UWF5 114 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 CITED2Q99967 270 aaPredicted RBP16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 KCNIP3Q9Y2W7 256 aa16.78■□□□□ 0.28
SDR39U1-208ENST00000554698 SOX15O60248 233 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 IGKV1-5P01602 117 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 ELANEP08246 267 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 P0C879 139 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 SLC6A1P30531 599 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 ASPHD1Q5U4P2 390 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 CENPSQ8N2Z9 138 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 TMEM68Q96MH6 324 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 SPIN2AQ99865 258 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 SPIN2BQ9BPZ2 258 aa16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 FOXA2Q9Y261 457 aaPredicted RBP16.77■□□□□ 0.28
SDR39U1-208ENST00000554698 ATG12O94817 140 aa16.77■□□□□ 0.27
SDR39U1-208ENST00000554698 OR9G9P0C7N8 305 aa16.77■□□□□ 0.27
SDR39U1-208ENST00000554698 PSMB8P28062 276 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms