RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 KRTAP10-3P60369 221 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 HTD2P86397 168 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 THOC7Q6I9Y2 204 aaKnown RBP9.99□□□□□ -0.81
SHMT2-214ENST00000554604 HEPN1Q6WQI6 88 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 FOXRED2Q8IWF2 684 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 BAP18Q8IXM2 172 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 ABHD12Q8N2K0 398 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 PRR18Q8N4B5 295 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 OR52M1Q8NGK5 317 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 PIFOQ8TCI5 191 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
SHMT2-214ENST00000554604 CORO2AQ92828 525 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 LIN7CQ9NUP9 197 aaKnown RBP9.99□□□□□ -0.81
SHMT2-214ENST00000554604 OR6C3Q9NZP0 311 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 PFDN2Q9UHV9 154 aa9.99□□□□□ -0.81
SHMT2-214ENST00000554604 RBM7Q9Y580 266 aaKnown RBP9.99□□□□□ -0.81
SHMT2-214ENST00000554604 ZNF729A6NN14 1252 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-214ENST00000554604 C15orf65H3BRN8 121 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 SPINT2O43291 252 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 CHST1O43916 411 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 MMP23AO75900 390 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 GAPDHP04406 335 aaKnown RBP9.98□□□□□ -0.81
SHMT2-214ENST00000554604 GZMHP20718 246 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 LDLRAD2Q5SZI1 272 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 DRAM1Q8N682 238 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 ZNF645Q8N7E2 425 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 OR13A1Q8NGR1 328 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 ZNF596Q8TC21 504 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 MRGPRDQ8TDS7 321 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
SHMT2-214ENST00000554604 CXorf58Q96LI9 332 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 C11orf1Q9H5F2 150 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 ZC4H2Q9NQZ6 224 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 TCF19Q9Y242 345 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 RCL1Q9Y2P8 373 aaKnown RBP9.98□□□□□ -0.81
SHMT2-214ENST00000554604 SIGLEC9Q9Y336 463 aa9.98□□□□□ -0.81
SHMT2-214ENST00000554604 A0A1B0GU03 582 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 TOR1AO14656 332 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 FGF16O43320 207 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 TNFSF12O43508 249 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 SERPINE2P07093 398 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 OR8U9P0C7N5 309 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 PVALBP20472 110 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-214ENST00000554604 NFYBP25208 207 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-214ENST00000554604 DYNLT3P51808 116 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 ARHGDIBP52566 201 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 PRRX1P54821 245 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 ID3Q02535 119 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 GNMTQ14749 295 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 ARSJQ5FYB0 599 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-214ENST00000554604 TCTEX1D1Q8N7M0 179 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 DMBX1Q8NFW5 382 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 OR52L2PQ8NGH6 319 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 OR8U1Q8NH10 309 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 UBALD1Q8TB05 177 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 ARL11Q969Q4 196 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 GPHA2Q96T91 129 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 PARP12Q9H0J9 701 aaKnown RBP9.97□□□□□ -0.81
SHMT2-214ENST00000554604 RAB9BQ9NP90 201 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-214ENST00000554604 DPM3Q9P2X0 92 aa9.97□□□□□ -0.81
SHMT2-214ENST00000554604 KBTBD11-OT1A0A1B0GTJ5 212 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 A6NDX4 124 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 MFSD2BA6NFX1 497 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 PITX3O75364 302 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 BRS3P32247 399 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 CEACAM3P40198 252 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 EIF4EBP1Q13541 118 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-214ENST00000554604 EIF5AL1Q6IS14 154 aaKnown RBP9.96□□□□□ -0.82
SHMT2-214ENST00000554604 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-214ENST00000554604 FAM219AQ8IW50 185 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
SHMT2-214ENST00000554604 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 PRSS22Q9GZN4 317 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 SDHAF2Q9NX18 166 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 FBXL17Q9UF56 701 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 JPT1Q9UK76 154 aa9.96□□□□□ -0.82
SHMT2-214ENST00000554604 YPEL1O60688 119 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 JTBO76095 146 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 CGB3P0DN86 165 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 CGB7P0DN87 165 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 CATR1Q13166 79 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 ZNF585BQ52M93 769 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 FAM74A1Q5RGS3 127 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 EDARADDQ8WWZ3 215 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 GPR146Q96CH1 333 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 YPEL2Q96QA6 119 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 ARV1Q9H2C2 271 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 OR2S2Q9NQN1 319 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 CALYQ9NYX4 217 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 NOTCH3Q9UM47 2321 aa9.95□□□□□ -0.82
SHMT2-214ENST00000554604 I3L521 148 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms