RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 WDR61Q9GZS3 305 aaKnown RBP3.67□□□□□ -1.82
ATXN3-227ENST00000554491 LINC00597Q9H2U6 94 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SAP30LQ9HAJ7 183 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 RDH14Q9HBH5 336 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 HES4Q9HCC6 221 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 BPIFA1Q9NP55 256 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 FAM206AQ9NX38 181 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 SCML2Q9UQR0 700 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 PAM16Q9Y3D7 125 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 DOCK9Q9BZ29 2069 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 CSMD2Q7Z408 3487 aa3.67□□□□□ -1.82
ATXN3-227ENST00000554491 TDRD6O60522 2096 aaKnown RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 TRBV6-7A0A0A0MS04 114 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 A0A0G2JK05 382 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 CXorf51AA0A1B0GTR3 108 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 A0A1W2PNU3 283 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 IRGMA1A4Y4 181 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ODAMA1E959 279 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A18PA6NE21 464 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A16PA6NEW6 464 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A9PA6NNJ1 464 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A5PA8MXJ8 464 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 H0YIG0 161 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 J3KR12 359 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 J3KTA2 159 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 K7EN84 100 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 CLDN5O00501 218 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 PHF1O43189 567 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 PAGE4O60829 102 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 CYB5AP00167 134 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SOD1P00441 154 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 VIPP01282 170 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 GAPDHP04406 335 aaKnown RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 HLA-DPB1P04440 258 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 IFNW1P05000 195 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 REG1AP05451 166 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SP1P08047 785 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SPINK8P0C7L1 97 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A15PP0C7V4 464 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM90A14PP0C7W9 464 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM106CPP0CH98 169 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 TFPIP10646 304 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 COX7A2P14406 83 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 PVRP15151 417 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ORM2P19652 201 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 MT3P25713 68 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 TSFMP43897 325 aaKnown RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF83P51522 516 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 STC1P52823 247 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 YPEL3P61236 119 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SLC35B1P78383 322 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF415Q09FC8 603 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 DUSP5Q16690 384 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SPATA45Q537H7 98 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 PRR30Q53SZ7 412 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM215Q68D42 235 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 HBMQ6B0K9 141 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SBSNQ6UWP8 590 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM159AQ6UWV7 190 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 IL17RELQ6ZVW7 336 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 DET1Q7L5Y6 550 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 C16orf82Q7Z2V1 217 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 TMEM179BQ7Z7N9 219 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 C17orf64Q86WR6 236 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SAXO1Q8IYX7 474 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 PAQR4Q8N4S7 273 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF709Q8N972 641 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FAM110DQ8TAY7 271 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 C2orf15Q8WU43 125 aaKnown RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 TWIST2Q8WVJ9 160 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ZNRF4Q8WWF5 429 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 AP1S3Q96PC3 154 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 DERL3Q96Q80 235 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 FEVQ99581 238 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 C19orf24Q9BVV8 132 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SCRT1Q9BWW7 348 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 SLC17A9Q9BYT1 436 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 MAP1LC3AQ9H492 121 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 C6orf106Q9H6K1 298 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 EHFQ9NZC4 300 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 IL36AQ9UHA7 158 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 KCNS2Q9ULS6 477 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 ZNF443Q9Y2A4 671 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-227ENST00000554491 LOXL2Q9Y4K0 774 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 DNAJC15Q9Y5T4 150 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 IER3IP1Q9Y5U9 82 aa3.66□□□□□ -1.82
ATXN3-227ENST00000554491 RP1P56715 2156 aa3.65□□□□□ -1.82
ATXN3-227ENST00000554491 A0A0B4J2E0 115 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 A0A1B0GX12 115 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 MEIS3P1A6NDR6 274 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR2T8A6NH00 312 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 OR4C46A6NHA9 309 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 MBD3L5A6NJ08 208 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-227ENST00000554491 CHST1O43916 411 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 NPIPB7O75200 414 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 TRAPPC6AO75865 159 aa3.65□□□□□ -1.83
ATXN3-227ENST00000554491 KBTBD11O94819 623 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms