RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 UCP1P25874 307 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 S100GP29377 79 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 ARHGDIBP52566 201 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 EGFEM1PQ0D2K5 195 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 CATR1Q13166 79 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 ANKRD55Q3KP44 614 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 OR2B11Q5JQS5 317 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 B9D2Q9BPU9 175 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 ALG5Q9Y673 324 aa11.05□□□□□ -0.64
SPTLC2-202ENST00000554365 IGHV3-72A0A0B4J1Y9 119 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 OR2F2O95006 317 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 DHFRP00374 187 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 HLA-AP01891 365 aaKnown RBP11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 VAMP1P23763 118 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 C4orf46Q504U0 113 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 MOB3BQ86TA1 216 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 SPAG16Q8N0X2 631 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 ZNF431Q8TF32 576 aaPredicted RBP11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 RBM14Q96PK6 669 aaKnown RBP11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 TMEM222Q9H0R3 208 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 FAM212BQ9NTI7 297 aaPredicted RBP11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 SLC35D1Q9NTN3 355 aa11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
SPTLC2-202ENST00000554365 A0A1B0GVG6 124 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 SNRPGP15A8MWD9 76 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 FCGR3BO75015 233 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 B3GALNT1O75752 331 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 CDS2O95674 445 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 IGKV1-16P04430 117 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 CD1BP29016 333 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 CCDC144NLQ6NUI1 221 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 CASTOR1Q8WTX7 329 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 RITA1Q96K30 269 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 TMEM56Q96MV1 263 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 PRELID3BQ9Y3B1 194 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 TMEM56-RWDD3S4R434 201 aa11.03□□□□□ -0.64
SPTLC2-202ENST00000554365 A0A0B4J2A0 478 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 PSMB11A5LHX3 300 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 S1PR2O95136 353 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 APOA2P02652 100 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 AMY1AP04745 511 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 KIR2DS2P43631 304 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 LPAR6P43657 344 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 TAGLNQ01995 201 aaKnown RBP11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 EBI3Q14213 229 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 LIN54Q6MZP7 749 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 PDPNQ86YL7 162 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 LRTM2Q8N967 370 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 SHPKQ9UHJ6 478 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 KCNIP3Q9Y2W7 256 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 WASHC3Q9Y3C0 194 aa11.02□□□□□ -0.65
SPTLC2-202ENST00000554365 TENM3Q9P273 2699 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 DBX1A6NMT0 343 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 M0QZK8 103 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 CRYZL1O95825 349 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 SNRNP70P08621 437 aaKnown RBP11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 RRASP10301 218 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 MC5RP33032 325 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 TMEM177Q53S58 311 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 ZNF329Q86UD4 541 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 Q8N6K4 173 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 CD300LFQ8TDQ1 290 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 OR51J1Q9H342 316 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 GPN1Q9HCN4 374 aaPredicted RBP11.01□□□□□ -0.65
SPTLC2-202ENST00000554365 NUDT19A8MXV4 375 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 CREBL2O60519 120 aaPredicted RBP11□□□□□ -0.65
SPTLC2-202ENST00000554365 HPRT1P00492 218 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 IGKV1D-33P01593 117 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 IGKV1-33P01594 117 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 IGKV1-5P01602 117 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 IGLV2-23P01705 113 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 P0C879 139 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 ANXA3P12429 323 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 CBX3Q13185 183 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 RTL8BQ17RB0 113 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 TMEM268Q5VZI3 342 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 C8orf86Q6ZUL3 223 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 THNSL2Q86YJ6 484 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 LGI3Q8N145 548 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 C12orf45Q8N5I9 185 aaPredicted RBP11□□□□□ -0.65
SPTLC2-202ENST00000554365 IL22RA2Q969J5 263 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 SEC22AQ96IW7 307 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 EAF1Q96JC9 268 aaPredicted RBP11□□□□□ -0.65
SPTLC2-202ENST00000554365 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
SPTLC2-202ENST00000554365 COMMD9Q9P000 198 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 MOB4Q9Y3A3 225 aa11□□□□□ -0.65
SPTLC2-202ENST00000554365 A0A0G2JRQ6 117 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms