RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 UFC1Q9Y3C8 167 aa4.94□□□□□ -1.62
ATXN3-224ENST00000554040 OR4C46A6NHA9 309 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 AQP12BA6NM10 295 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 EPM2AB3EWF7 344 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 M0R1X1 148 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 PDCD6O75340 191 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 CLEC3BP05452 202 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 RBMY1A1P0DJD3 496 aaKnown RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 RBMY1CP0DJD4 496 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 MYOD1P15172 320 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 PSMB6P28072 239 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 SNRPGP62308 76 aaKnown RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 MRPL28Q13084 256 aaKnown RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 KDM4DQ6B0I6 523 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF880Q6PDB4 577 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 LHFPL3Q86UP9 236 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 AQP12AQ8IXF9 295 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 SYS1Q8N2H4 156 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 GPR148Q8TDV2 347 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 MRPL48Q96GC5 212 aaKnown RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 MYCBPQ99417 103 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF184Q99676 751 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-224ENST00000554040 SPIN2AQ99865 258 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 SPIN2BQ9BPZ2 258 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF221Q9UK13 617 aa4.93□□□□□ -1.62
ATXN3-224ENST00000554040 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 FKBP6O75344 327 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 CRTAPO75718 401 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 NAPSAO96009 420 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 CA1P00915 261 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 IFNA21P01568 189 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 IFNA17P01571 189 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 CD74P04233 296 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 MGMTP16455 207 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 IGFBP3P17936 291 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 ZBTB25P24278 435 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 POLR2IP36954 125 aaKnown RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 GBX2P52951 348 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 CMC4P56277 68 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 UBE2KP61086 200 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 KLK9Q2XQG4 91 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 VMA21Q3ZAQ7 101 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 IDO2Q6ZQW0 420 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 TRUB1Q8WWH5 349 aaKnown RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 ACOT12Q8WYK0 555 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 MUL1Q969V5 352 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 EEF1AKMT3Q96AZ1 226 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 NEDD4LQ96PU5 975 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 FAAP24Q9BTP7 215 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 CHRDL1Q9BU40 450 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 OR1A1Q9P1Q5 309 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 KLK9Q9UKQ9 250 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 EXOGQ9Y2C4 368 aaKnown RBP4.92□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF257Q9Y2Q1 563 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 S4R3C0 116 aa4.92□□□□□ -1.62
ATXN3-224ENST00000554040 TRBV7-1A0A0A6YYK4 115 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 IGHV3-35A0A0C4DH35 117 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 HMX3A6NHT5 357 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 C15orf61A6NNL5 157 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 NPIPB5A8MRT5 1133 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 DYNC1I1O14576 645 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 ACTL6BO94805 426 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 CTSDP07339 412 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-224ENST00000554040 GSTT2P0CG29 244 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 GSTT2BP0CG30 244 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 RRASP10301 218 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 MIFP14174 115 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 GTF2A1P52655 376 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-224ENST00000554040 CBX3Q13185 183 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 C12orf74Q32Q52 190 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 AWAT2Q6E213 333 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 C19orf35Q6ZS72 473 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF367Q7RTV3 350 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 CEACAM19Q7Z692 300 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 UBE2DNLQ8IWF7 75 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 JAGN1Q8N5M9 183 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-224ENST00000554040 CCDC124Q96CT7 223 aaKnown RBP4.91□□□□□ -1.62
ATXN3-224ENST00000554040 ORAI1Q96D31 301 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF436Q9C0F3 470 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-224ENST00000554040 ZNF430Q9H8G1 570 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-224ENST00000554040 SLC45A2Q9UMX9 530 aa4.91□□□□□ -1.62
ATXN3-224ENST00000554040 TRBV6-6A0A0A6YYG2 114 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 LINC00473A8K010 186 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 TEX22C9J3V5 150 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 G3V2T6 193 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 MRPS14O60783 128 aaKnown RBP4.9□□□□□ -1.63
ATXN3-224ENST00000554040 CRYGCP07315 174 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 IL6RP08887 468 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-224ENST00000554040 RPA2P15927 270 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 TPBGQ13641 420 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 RTL8BQ17RB0 113 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 RNF212Q495C1 297 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 C10orf55Q5SWW7 151 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 PLET1Q6UQ28 207 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 MOB1BQ7L9L4 216 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 C6orf201Q7Z4U5 140 aa4.9□□□□□ -1.63
ATXN3-224ENST00000554040 AMIGO2Q86SJ2 522 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms