RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NCBP2LA6PVI3 153 aaKnown RBP8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 L7N2F9 121 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 UPK2O00526 184 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 NBR2O15453 112 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 SLC25A17O43808 307 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 KBTBD11O94819 623 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 LY86O95711 162 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 SAA1P0DJI8 122 aaPredicted RBP8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 VAMP2P63027 116 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 ID3Q02535 119 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 EBI3Q14213 229 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 PSG5Q15238 335 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 IZUMO4Q1ZYL8 232 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 FAM120AOSQ5T036 256 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 FOXRED2Q8IWF2 684 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 MRPL41Q8IXM3 137 aaKnown RBP8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 MMD2Q8IY49 270 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 OR4D5Q8NGN0 318 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 TMEM167AQ8TBQ9 72 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 HYLS1Q96M11 299 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 SSX3Q99909 188 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 COMMD5Q9GZQ3 224 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 METTL1Q9UBP6 276 aaKnown RBP8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 LSM5Q9Y4Y9 91 aaKnown RBP8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 POMT1Q9Y6A1 747 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 ARHGAP32A7KAX9 2087 aa8.4□□□□□ -1.06
TMEM55B-205ENST00000554028 PDZD2O15018 2839 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 SRRM4A7MD48 611 aaKnown RBP8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 RRHO14718 337 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 GPR137BO60478 399 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 PITX3O75364 302 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 MPC2O95563 127 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 FSHBP01225 129 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 MBPP02686 304 aaPredicted RBP8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 C1QBP02746 253 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 FGF2P09038 288 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 P0C879 139 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 CD24P25063 80 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 PAX6P26367 422 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 MAS1LP35410 378 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 SPCS3P61009 180 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 RPL8P62917 257 aaKnown RBP8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 RAB32Q13637 225 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 CXorf66Q5JRM2 361 aaPredicted RBP8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 C11orf87Q6NUJ2 197 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 RBMS3Q6XE24 437 aaKnown RBP8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 Q6ZRM9 215 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 C9orf139Q6ZV77 190 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 ZNF429Q86V71 674 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 PUSL1Q8N0Z8 303 aaKnown RBP8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 NPBQ8NG41 125 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 OR52E5Q8NH55 327 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 AJUBAQ96IF1 538 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 RASL11BQ9BPW5 248 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 TMEM160Q9NX00 188 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 ZNF257Q9Y2Q1 563 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 NSG2Q9Y328 171 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
TMEM55B-205ENST00000554028 MED13LQ71F56 2210 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 NBPF19A0A087WUL8 3843 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 FXYD6-FXYD2A0A087WZ82 144 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 C15orf61A6NNL5 157 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 E5RGE8 158 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 K7EPK0 472 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 SYNGR2O43760 224 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 NXPH3O95157 252 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 CNIH1O95406 144 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 IGLV2-23P01705 113 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 OR9G9P0C7N8 305 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 SLC25A4P12235 298 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 F2RL1P55085 397 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 OR2B8PP59922 312 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 RPL23AP62750 156 aaKnown RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 RELBQ01201 579 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 TNFRSF9Q07011 255 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 IL15RAQ13261 267 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 DEFB112Q30KQ8 113 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 PRSS54Q6PEW0 395 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 ZNF546Q86UE3 836 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 NOXA1Q86UR1 476 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 PPP1R27Q86WC6 154 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 FAM71E2Q8N5Q1 922 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 OR1L8Q8NGR8 309 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 OR5B3Q8NH48 314 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 OR5R1Q8NH85 324 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 C22orf15Q8WYQ4 148 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 WDR89Q96FK6 387 aaPredicted RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 RITA1Q96K30 269 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 HSPB7Q9UBY9 170 aa8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 FOXA2Q9Y261 457 aaPredicted RBP8.38□□□□□ -1.07
TMEM55B-205ENST00000554028 SIGLEC9Q9Y336 463 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms