RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 METTL1Q9UBP6 276 aaKnown RBP11.61□□□□□ -0.55
SHMT2-210ENST00000553950 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 MDFIC2A0A1B0GVS7 189 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 A6NDX4 124 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 HMX3A6NHT5 357 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 FAM25EA8MYX2 175 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 ADAP1O75689 374 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 GIPP09681 153 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-210ENST00000553950 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 PET100P0DJ07 73 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 BCAP31P51572 246 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 PSG5Q15238 335 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 IAH1Q2TAA2 248 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-210ENST00000553950 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 RASL11BQ9BPW5 248 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 NMES1Q9C002 83 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 RANBP3Q9H6Z4 567 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-210ENST00000553950 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-210ENST00000553950 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
SHMT2-210ENST00000553950 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-210ENST00000553950 C13orf42A0A1B0GVH6 325 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 NCBP2LA6PVI3 153 aaKnown RBP11.59□□□□□ -0.55
SHMT2-210ENST00000553950 CLDN34H7C241 214 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 UPK2O00526 184 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 LY86O95711 162 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 PAX6P26367 422 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 RPL15P61313 204 aaKnown RBP11.59□□□□□ -0.55
SHMT2-210ENST00000553950 RPL8P62917 257 aaKnown RBP11.59□□□□□ -0.55
SHMT2-210ENST00000553950 FCN2Q15485 313 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 C5orf64Q2M2E5 130 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 PPP1R27Q86WC6 154 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 SIGLECL1Q8N7X8 197 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 ZNF48Q96MX3 618 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-210ENST00000553950 ZNF257Q9Y2Q1 563 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 SIGLEC9Q9Y336 463 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 CELSR1Q9NYQ6 3014 aa11.59□□□□□ -0.55
SHMT2-210ENST00000553950 SRRM4A7MD48 611 aaKnown RBP11.58□□□□□ -0.56
SHMT2-210ENST00000553950 CYSRT1A8MQ03 144 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 INAFM1C9JVW0 142 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 CCSO14618 274 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 MED6O75586 246 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 HLA-DRB1P01911 266 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 CD24P25063 80 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 RAP2BP61225 183 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 HNF4GQ14541 408 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 AARDQ4LEZ3 155 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 VKORC1L1Q8N0U8 176 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 FAM71E2Q8N5Q1 922 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-210ENST00000553950 OR52E5Q8NH55 327 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 PIFOQ8TCI5 191 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 GPR146Q96CH1 333 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 CLCC1Q96S66 551 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 ZNF436Q9C0F3 470 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-210ENST00000553950 COMMD5Q9GZQ3 224 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 TMEM14BQ9NUH8 114 aa11.58□□□□□ -0.56
SHMT2-210ENST00000553950 WRBO00258 174 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-210ENST00000553950 KCNAB3O43448 404 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 CRLF1O75462 422 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 CRYGBP07316 175 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 RELBQ01201 579 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 SRSF4Q08170 494 aaKnown RBP11.57□□□□□ -0.56
SHMT2-210ENST00000553950 FGL1Q08830 312 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 PRSS8Q16651 343 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 HSD17B13Q7Z5P4 300 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-210ENST00000553950 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 Q8N9W7 124 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 OR11H7Q8NGC8 314 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 FYTTD1Q96QD9 318 aaKnown RBP11.57□□□□□ -0.56
SHMT2-210ENST00000553950 SRSF8Q9BRL6 282 aaKnown RBP11.57□□□□□ -0.56
SHMT2-210ENST00000553950 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 GSX1Q9H4S2 264 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-210ENST00000553950 HIVEP1P15822 2718 aa11.57□□□□□ -0.56
SHMT2-210ENST00000553950 A0A0G2JRQ6 117 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 IL6RP08887 468 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-210ENST00000553950 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 CNTFRP26992 372 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 NKX2-1P43699 371 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-210ENST00000553950 H2BFSP57053 126 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 OR2B8PP59922 312 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 LY6EQ16553 131 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 TET2Q6N021 2002 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-210ENST00000553950 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 OR4D5Q8NGN0 318 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-210ENST00000553950 NPFFR1Q9GZQ6 430 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 ZNF430Q9H8G1 570 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-210ENST00000553950 PLSCR3Q9NRY6 295 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
SHMT2-210ENST00000553950 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-210ENST00000553950 TNCP24821 2201 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms