RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FBXO7Q9Y3I1 522 aa5.97□□□□□ -1.45
ATXN3-221ENST00000553498 AMMECR1Q9Y4X0 333 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-221ENST00000553498 ANKRD11Q6UB99 2663 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-221ENST00000553498 BSNQ9UPA5 3926 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 DCHS1Q96JQ0 3298 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 PMS2P5A8MQ11 134 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 RNASEK-C17orf49H0YIS7 233 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 H3BP45 60 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 H7C2Y5 167 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 M0R1W7 72 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 SNAPINO95295 136 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 LIPFP07098 398 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 IGFBP2P18065 325 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 USF1P22415 310 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 PLA2G5P39877 138 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 VDAC2P45880 294 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 LGALS7P47929 136 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 GNG10P50151 68 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 OR2B8PP59922 312 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 ERVFRD-1P60508 538 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 TMEM267Q0VDI3 215 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 MLANAQ16655 118 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 IZUMO4Q1ZYL8 232 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 OR4A47Q6IF82 309 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 FAM53AQ6NSI3 398 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 CLEC9AQ6UXN8 241 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 ZNF841Q6ZN19 808 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 TMEM182Q6ZP80 229 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 C1orf122Q6ZSJ8 110 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 THNSL2Q86YJ6 484 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 ABHD12Q8N2K0 398 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 KIR3DL3Q8N743 410 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 ZNF709Q8N972 641 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 LY6G5BQ8NDX9 201 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 OR13D1Q8NGV5 346 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 FAM213BQ8TBF2 198 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 TAF15Q92804 592 aaKnown RBP eCLIP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 LHX4Q969G2 390 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 ST6GALNAC6Q969X2 333 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 FLYWCH2Q96CP2 140 aaKnown RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 NARS2Q96I59 477 aaKnown RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 RNF5Q99942 180 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 QTRT1Q9BXR0 403 aaKnown RBP5.96□□□□□ -1.46
ATXN3-221ENST00000553498 SH3BGRL3Q9H299 93 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 TREM1Q9NP99 234 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 KIAA1456Q9P272 454 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 WASHC3Q9Y3C0 194 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 KPTNQ9Y664 436 aa5.96□□□□□ -1.46
ATXN3-221ENST00000553498 CEP295Q9C0D2 2601 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 DMXL2Q8TDJ6 3036 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 PPIAL4CA0A0B4J2A2 164 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 H0YJW9 148 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 UPK2O00526 184 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 LAMA5O15230 3695 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 MMP23AO75900 390 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 KBTBD11O94819 623 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 NXPH3O95157 252 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 IGLV1-47P01700 117 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 OR9G9P0C7N8 305 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 PPIAL4GP0DN37 164 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 CCL3L1P16619 93 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 MDKP21741 143 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-221ENST00000553498 GNLYP22749 145 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 COL8A2P25067 703 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 DLK1P80370 383 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 PRCDQ00LT1 54 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 CDSNQ15517 529 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 GUK1Q16774 197 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 TMEM41BQ5BJD5 291 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 WDR25Q64LD2 544 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-221ENST00000553498 HAPLN4Q86UW8 402 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 TGIF2LXQ8IUE1 241 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 BOD1L1Q8NFC6 3051 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 OR10G4Q8NGN3 311 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 MBD3L1Q8WWY6 194 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 LEAP2Q969E1 77 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 OR4C12Q96R67 309 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 NABP2Q9BQ15 211 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 CLEC7AQ9BXN2 247 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 PATZ1Q9HBE1 687 aaKnown RBP5.95□□□□□ -1.46
ATXN3-221ENST00000553498 HEYLQ9NQ87 328 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-221ENST00000553498 TCF19Q9Y242 345 aa5.95□□□□□ -1.46
ATXN3-221ENST00000553498 APC2O95996 2303 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 MGAQ8IWI9 3026 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 A0A1W2PN81 502 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 MED19A0JLT2 244 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-221ENST00000553498 MEX3AA1L020 520 aaKnown RBP5.94□□□□□ -1.46
ATXN3-221ENST00000553498 A6NNC1 897 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 F8W036 122 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 FCN3O75636 299 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 IFNA1P01562 189 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 IFNA10P01566 189 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 APOC3P02656 99 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 SOD3P08294 240 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 CD1BP29016 333 aa5.94□□□□□ -1.46
ATXN3-221ENST00000553498 MAS1LP35410 378 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms