RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TGIF2LXQ8IUE1 241 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 CLVS1Q8IUQ0 354 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-220ENST00000553491 FAM219AQ8IW50 185 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 SAMD12Q8N8I0 201 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 SLC24A4Q8NFF2 622 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 OR52M1Q8NGK5 317 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 OR4P4Q8NGL7 312 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 OR10J5Q8NHC4 309 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 CT45A3Q8NHU0 189 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 LGALS14Q8TCE9 139 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 ABHD14BQ96IU4 210 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 AKR1E2Q96JD6 320 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 S1PR3Q99500 378 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 RASL11BQ9BPW5 248 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 NAA50Q9GZZ1 169 aaKnown RBP3.71□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF221Q9UK13 617 aa3.71□□□□□ -1.82
ATXN3-220ENST00000553491 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-220ENST00000553491 CUBNO60494 3623 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 IGHV1-3A0A0C4DH29 117 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 A0A1B0GUS0 222 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 A6NDX4 124 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 TMEM235A6NFC5 223 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF736B4DX44 427 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-220ENST00000553491 LY6LH3BQJ8 138 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 RGS5O15539 181 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 CHST1O43916 411 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 YPEL1O60688 119 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 IGLV1-47P01700 117 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 OR8U9P0C7N5 309 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 CD37P11049 281 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 PTHLHP12272 177 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
ATXN3-220ENST00000553491 CD34P28906 385 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 SOX6P35712 828 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 VDAC2P45880 294 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-220ENST00000553491 RORCP51449 518 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 ARPC4P59998 168 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 ERVFC1-1P60608 527 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 HLA-DRB3P79483 266 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 HTD2P86397 168 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 PLGLAQ15195 96 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 AANATQ16613 207 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 NSUN5P1Q3KNT7 163 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 RPL39P5Q59GN2 51 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 NFE4Q86UQ8 179 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 THAP8Q8NA92 274 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 OR2T10Q8NGZ9 312 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 OR8U1Q8NH10 309 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 LINC01006Q8NI28 216 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 OCC1Q8TAD7 63 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 PIFOQ8TCI5 191 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 ST6GAL2Q96JF0 529 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 RBM14Q96PK6 669 aaKnown RBP3.7□□□□□ -1.82
ATXN3-220ENST00000553491 YPEL2Q96QA6 119 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 CLCC1Q96S66 551 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 CITED2Q99967 270 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-220ENST00000553491 ZNF251Q9BRH9 671 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 DCUN1D5Q9BTE7 237 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 DCSTAMPQ9H295 470 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 DNAJC4Q9NNZ3 241 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 PALMDQ9NP74 551 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 C12orf4Q9NQ89 552 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 IFT46Q9NQC8 304 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 RHBDL2Q9NX52 303 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 OR1A1Q9P1Q5 309 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
ATXN3-220ENST00000553491 LINC00527Q9UJ94 153 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 MGAT4AQ9UM21 535 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 TCF19Q9Y242 345 aa3.7□□□□□ -1.82
ATXN3-220ENST00000553491 TNCP24821 2201 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 TCRBV4S1A1TA0A5B7 111 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 SERPINE3A8MV23 424 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 OOSP1A8MZH6 123 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 M0R1X1 148 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 RAB29O14966 203 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 FABP7O15540 132 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 BUB3O43684 328 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 HPGDSO60760 199 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 SCGNO76038 276 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 NDUFA7O95182 113 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 NAPSAO96009 420 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 MOSP00540 346 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 PMP2P02689 132 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 FCGR3AP08637 254 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 NFYAP23511 347 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-220ENST00000553491 PRSS3P35030 304 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 KIR2DS4P43632 304 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 PITPNAQ00169 270 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 ARL16Q0P5N6 197 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 KIR2DS1Q14954 304 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 ARL6IP1Q15041 203 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 HMGN3Q15651 99 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 UBE2NLQ5JXB2 153 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 TMEM69Q5SWH9 247 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 HACD4Q5VWC8 232 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 SLC25A48Q6ZT89 311 aaKnown RBP3.69□□□□□ -1.82
ATXN3-220ENST00000553491 MOB1BQ7L9L4 216 aa3.69□□□□□ -1.82
ATXN3-220ENST00000553491 SNX29P2Q8IUI4 249 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms