RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 NDUFA13Q9P0J0 144 aa14.38□□□□□ -0.11
CPSF2-202ENST00000553427 VSIG4Q9Y279 399 aa14.38□□□□□ -0.11
CPSF2-202ENST00000553427 FABP12A6NFH5 140 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 RLN1P04808 185 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 NQO2P16083 231 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 F2RP25116 425 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 MAS1LP35410 378 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 MEF2DQ14814 521 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 TNXAQ16473 311 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 STEAP1BQ6NZ63 245 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 VKORC1L1Q8N0U8 176 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 CADM3Q8N126 398 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 LINC00482Q8N8I6 264 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 SRSF12Q8WXF0 261 aaKnown RBP14.37□□□□□ -0.11
CPSF2-202ENST00000553427 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
CPSF2-202ENST00000553427 ZNF486Q96H40 463 aaPredicted RBP14.37□□□□□ -0.11
CPSF2-202ENST00000553427 SLA2Q9H6Q3 261 aa14.37□□□□□ -0.11
CPSF2-202ENST00000553427 ACTL6BO94805 426 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 RAB3DO95716 219 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 CD40LGP29965 261 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 RND3P61587 244 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 ASPHD1Q5U4P2 390 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 RAX2Q96IS3 184 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 SPIN2AQ99865 258 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 SPIN2BQ9BPZ2 258 aa14.36□□□□□ -0.11
CPSF2-202ENST00000553427 CCL24O00175 119 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 S1PR2O95136 353 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 IL6RP08887 468 aaPredicted RBP14.35□□□□□ -0.11
CPSF2-202ENST00000553427 CD33P20138 364 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPSF2-202ENST00000553427 S100A5P33763 92 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 FHL3Q13643 280 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 PHLDA2Q53GA4 152 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 KPRPQ5T749 579 aaPredicted RBP14.35□□□□□ -0.11
CPSF2-202ENST00000553427 OR4A47Q6IF82 309 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 MRPL41Q8IXM3 137 aaKnown RBP14.35□□□□□ -0.11
CPSF2-202ENST00000553427 OR4D10Q8NGI6 311 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 SLC2A9Q9NRM0 540 aa14.35□□□□□ -0.11
CPSF2-202ENST00000553427 ANKRD20A5PA0PJZ0 165 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 MSGN1A6NI15 193 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 I3L521 148 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 ZNF735P0CB33 412 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 AKAIN1P0CW23 69 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 ECI1P42126 302 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 CCDC190Q86UF4 302 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 TERB2Q8NHR7 220 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 RCC1LQ96I51 464 aaKnown RBP14.34□□□□□ -0.11
CPSF2-202ENST00000553427 GNB4Q9HAV0 340 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 V9GYH0 126 aa14.34□□□□□ -0.11
CPSF2-202ENST00000553427 DUS4LO95620 317 aaKnown RBP14.33□□□□□ -0.12
CPSF2-202ENST00000553427 RPL8P62917 257 aaKnown RBP14.33□□□□□ -0.12
CPSF2-202ENST00000553427 ZNF585BQ52M93 769 aa14.33□□□□□ -0.12
CPSF2-202ENST00000553427 SSX9Q7RTT3 188 aa14.33□□□□□ -0.12
CPSF2-202ENST00000553427 TBC1D26Q86UD7 250 aa14.33□□□□□ -0.12
CPSF2-202ENST00000553427 ADAD2Q8NCV1 583 aaKnown RBP14.33□□□□□ -0.12
CPSF2-202ENST00000553427 PHB2Q99623 299 aa14.33□□□□□ -0.12
CPSF2-202ENST00000553427 SLC2A8Q9NY64 477 aa14.33□□□□□ -0.12
CPSF2-202ENST00000553427 MARCH11A6NNE9 402 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 DISC1C4P0D8 188 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 LGALS1P09382 135 aaKnown RBP14.32□□□□□ -0.12
CPSF2-202ENST00000553427 OR9G9P0C7N8 305 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 PGAM2P15259 253 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 HLA-GP17693 338 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 ETV6P41212 452 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 RPL27AP46776 148 aaKnown RBP14.32□□□□□ -0.12
CPSF2-202ENST00000553427 TPPP2P59282 170 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 ERVK-16P61578 105 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 SURF2Q15527 256 aaPredicted RBP14.32□□□□□ -0.12
CPSF2-202ENST00000553427 DEFB136Q30KP8 78 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 BEAN1Q3B7T3 259 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 C10orf55Q5SWW7 151 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 OR4C16Q8NGL9 310 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 ZFAND1Q8TCF1 268 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 TMEM140Q9NV12 185 aa14.32□□□□□ -0.12
CPSF2-202ENST00000553427 TEX22C9J3V5 150 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 G3V4G9 280 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 UPK2O00526 184 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 MPPED1O15442 326 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 TRGV3P03979 118 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 LPAR6P43657 344 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 PPP5CP53041 499 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 ZNF79Q15937 498 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 SLC25A42Q86VD7 318 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 TTC9CQ8N5M4 171 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 DMBX1Q8NFW5 382 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 OR5T1Q8NG75 326 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 CASTOR1Q8WTX7 329 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 TRIM63Q969Q1 353 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 MRGPRFQ96AM1 343 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 PRRT1Q99946 306 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 GPR61Q9BZJ8 451 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 HRASLSQ9HDD0 168 aa14.31□□□□□ -0.12
CPSF2-202ENST00000553427 A0A0G2JLM5 398 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 DPPA5A6NC42 116 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 H0Y980 276 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
CPSF2-202ENST00000553427 PIGPP57054 158 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 ZNF616Q08AN1 781 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 SCGB2B2Q4G0G5 96 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms