RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ALKBH6Q3KRA9 238 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ACSF3Q4G176 576 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ZNF826PQ6ZT77 177 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 SSMEM1Q8WWF3 244 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 GALMQ96C23 342 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 PXMP4Q9Y6I8 212 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 J3QT63 122 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 WNT9BO14905 357 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 SERF1AO75920 110 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 VENTXO95231 258 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 CRISP2P16562 243 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 CD82P27701 267 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 CATR1Q13166 79 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ATP6V1FQ16864 119 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ZNF497Q6ZNH5 498 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 CENPVQ7Z7K6 275 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-230ENST00000552960 MPC1Q9Y5U8 109 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
HDAC7-230ENST00000552960 SH2D1BO14796 132 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 SP1P08047 785 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 IER3P46695 156 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 SOX8P57073 446 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 RPL15P61313 204 aaKnown RBP10.32□□□□□ -0.76
HDAC7-230ENST00000552960 LCN2P80188 198 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 VKORC1L1Q8N0U8 176 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 OR2J1Q9GZK6 312 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 BOKQ9UMX3 212 aaPredicted RBP10.32□□□□□ -0.76
HDAC7-230ENST00000552960 TRBV20OR9-2A0A075B6H5 130 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 F2Z2F3 143 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 FCN1O00602 326 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 AQP7O14520 342 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 TYMSP04818 313 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 CD1BP29016 333 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 MIC13Q5XKP0 118 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 R3HDM4Q96D70 268 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 LPAR2Q9HBW0 351 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 HEYLQ9NQ87 328 aaPredicted RBP10.32□□□□□ -0.76
HDAC7-230ENST00000552960 TMEM106BQ9NUM4 274 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 ELOVL5Q9NYP7 299 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 PSG11Q9UQ72 335 aa10.32□□□□□ -0.76
HDAC7-230ENST00000552960 SPTBN1Q01082 2364 aaKnown RBP10.31□□□□□ -0.76
HDAC7-230ENST00000552960 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 FAM90A26D6RGX4 464 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 PSPNO60542 156 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 CLDN18P56856 261 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 TPPP2P59282 170 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 Q6ZWC4 215 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 LINC00596Q86U02 117 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 MDS2Q8NDY4 140 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 OR10G8Q8NGN5 311 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 RTL8AQ9BWD3 113 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 COL12A1Q99715 3063 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 TRBV6-6A0A0A6YYG2 114 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 PDE6DO43924 150 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 ARR3P36575 388 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 RPP30P78346 268 aaKnown RBP10.31□□□□□ -0.76
HDAC7-230ENST00000552960 WDR86Q86TI4 376 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
HDAC7-230ENST00000552960 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 TMEM210A6NLX4 147 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 CELA3BP08861 270 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 SSTR5P35346 364 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 Q6ZVH6 145 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 MOB1BQ7L9L4 216 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 MDP1Q86V88 176 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 C5orf30Q96GV9 206 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 FER1L6-AS2Q96M78 137 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 MRPL18Q9H0U6 180 aaKnown RBP10.31□□□□□ -0.76
HDAC7-230ENST00000552960 OBP2BQ9NPH6 170 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 PPP1R14DQ9NXH3 145 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 PTPRBP23467 1997 aa10.31□□□□□ -0.76
HDAC7-230ENST00000552960 TNCP24821 2201 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 HBZP02008 142 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 EDDM3AQ14507 147 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 HLA-DRB5Q30154 266 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 DEFB109BQ30KR1 87 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 ETFRF1Q6IPR1 90 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 BTF3L4Q96K17 158 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 HINT2Q9BX68 163 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 ABI3Q9P2A4 366 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 PMS2P5A8MQ11 134 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 SNURFLB1AK76 121 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 FCGR3BO75015 233 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 MMDQ15546 238 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 OR5AU1Q8NGC0 362 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
HDAC7-230ENST00000552960 DCTN5Q9BTE1 182 aa10.3□□□□□ -0.76
HDAC7-230ENST00000552960 HEATR1Q9H583 2144 aaKnown RBP10.3□□□□□ -0.76
HDAC7-230ENST00000552960 KIR2DL5BA0A0G2JN68 375 aa10.29□□□□□ -0.76
HDAC7-230ENST00000552960 KIR2DL5BA0A0G2JPC4 375 aa10.29□□□□□ -0.76
HDAC7-230ENST00000552960 LINC00473A8K010 186 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms