RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HSMCR30P0CW71 290 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF44P15621 663 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 IGFBP3P17936 291 aaPredicted RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 BCL3P20749 454 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 CD1BP29016 333 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RAB9AP51151 201 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 DAPP51397 102 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 BLVRAP53004 296 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RPS11P62280 158 aaKnown RBP eCLIP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 AESQ08117 197 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ASAH1Q13510 395 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RIPK1Q13546 671 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 GINS1Q14691 196 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SMIM21Q3B7S5 101 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 Q3ZCU0 254 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SPIN3Q5JUX0 258 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 LY6G6FQ5SQ64 297 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SLC25A30Q5SVS4 291 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 CLVS2Q5SYC1 327 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ATAD3CQ5T2N8 411 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RNLSQ5VYX0 342 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 TMEM236Q5W0B7 351 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 TTC23Q5W5X9 447 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR2T5Q6IEZ7 315 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 PYHIN1Q6K0P9 492 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RPL13AP3Q6NVV1 102 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 FAM71F2Q6NXP2 309 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 PLEKHG7Q6ZR37 379 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SLC25A48Q6ZT89 311 aaKnown RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SLC25A26Q70HW3 274 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ARPINQ7Z6K5 226 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 MOB3BQ86TA1 216 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF429Q86V71 674 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ERI1Q8IV48 349 aaKnown RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SAXO1Q8IYX7 474 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SLC38A6Q8IZM9 456 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 PGAM4Q8N0Y7 254 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 FAM58AQ8N1B3 248 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 KLHL30-AS1Q8NEE0 82 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 PROKR2Q8NFJ6 384 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR11H1Q8NG94 326 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR6N2Q8NGY6 317 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR2T29Q8NH02 315 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR8S1Q8NH09 359 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR8U1Q8NH10 309 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR56B4Q8NH76 319 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 OR9G1Q8NH87 305 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RTN4IP1Q8WWV3 396 aaPredicted RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 LZICQ8WZA0 190 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 LEAP2Q969E1 77 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 C10orf35Q96D05 121 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 CEP19Q96LK0 163 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 KCTD7Q96MP8 289 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SPACA5Q96QH8 159 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 TM2D1Q9BX74 207 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 KRTAP2-2Q9BYT5 123 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 CHST6Q9GZX3 395 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 NSRP1Q9H0G5 558 aaKnown RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 VCX2Q9H322 139 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 CACYBPQ9HB71 228 aaKnown RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 RETNQ9HD89 108 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 ZC4H2Q9NQZ6 224 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 GID8Q9NWU2 228 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 SMPD3Q9NY59 655 aaPredicted RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 NKIRAS1Q9NYS0 192 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 PIPOXQ9P0Z9 390 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 BAIAP2Q9UQB8 552 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 PIGLQ9Y2B2 252 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 R4GMQ9 66 aa1.69□□□□□ -2.14
CPSF6-207ENST00000551516 DMBT1Q9UGM3 2413 aaPredicted RBP1.69□□□□□ -2.14
CPSF6-207ENST00000551516 MUC4Q99102 2169 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 IGHV3-72A0A0B4J1Y9 119 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 METTL21EPA6NDL7 271 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF729A6NN14 1252 aaPredicted RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 SEC14L6B5MCN3 397 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 H3BMQ9 156 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 TNFRSF11BO00300 401 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 RTL8CO15255 209 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 GPX5O75715 221 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 SULT1C4O75897 302 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 CYB5AP00167 134 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 IGKV1D-33P01593 117 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 IGKV1-33P01594 117 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 TRBV12-3P01733 135 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 IGHV3-7P01780 117 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 HLA-DRB1P01911 266 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ALDOBP05062 364 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 FABP3P05413 133 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 DBTP11182 482 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ATF1P18846 271 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 GATA2P23769 480 aaPredicted RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 SSTR5P35346 364 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 RPL29P47914 159 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR12D2P58182 307 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 SMIM11AP58511 58 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ADARB1P78563 741 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 QRFPP83859 136 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 FGL1Q08830 312 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF616Q08AN1 781 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 RAB40BQ12829 278 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms