RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 RAB14P61106 215 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 C5orf46Q6UWT4 87 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 TMEM161BQ8NDZ6 487 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 OR2T27Q8NH04 317 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 MBD3L1Q8WWY6 194 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 Q96M85 177 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 CST9LQ9H4G1 147 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 AK3Q9UIJ7 227 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 ANAPC10Q9UM13 185 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 FLT4P35916 1363 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 SCAF11Q99590 1463 aaKnown RBP0.9□□□□□ -2.27
SCAF11-215ENST00000551391 CCDC88CQ9P219 2028 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 MED13Q9UHV7 2174 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 TRAV38-1A0A0B4J264 116 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 A0A0D9SEW6 157 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 IGHV1-69-2A0A0G2JMI3 117 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 PLA2G10O15496 165 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 SSNA1O43805 119 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 MRPS14O60783 128 aaKnown RBP0.89□□□□□ -2.27
SCAF11-215ENST00000551391 EVX1P49640 407 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 SLC36A2Q495M3 483 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 CST9Q5W186 159 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 PDPK2PQ6A1A2 396 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 FP248Q71RG6 208 aaPredicted RBP0.89□□□□□ -2.27
SCAF11-215ENST00000551391 UMODL1-AS1Q8N2C9 162 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 SLC22A24Q8N4F4 322 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 RPP25LQ8N5L8 163 aaKnown RBP0.89□□□□□ -2.27
SCAF11-215ENST00000551391 SGMS2Q8NHU3 365 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 CMTM5Q96DZ9 223 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 UPF3BQ9BZI7 483 aaKnown RBP0.89□□□□□ -2.27
SCAF11-215ENST00000551391 CHST6Q9GZX3 395 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 GPR84Q9NQS5 396 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 MED9Q9NWA0 146 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 DKKL1Q9UK85 242 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 PRELID1Q9Y255 219 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 COQ4Q9Y3A0 265 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
SCAF11-215ENST00000551391 MALRD1Q5VYJ5 2156 aa0.89□□□□□ -2.27
SCAF11-215ENST00000551391 PTPRBP23467 1997 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 CPAMD8Q8IZJ3 1885 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 PTPRSQ13332 1948 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 ABCC11Q96J66 1382 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 IGKV2-40A0A087WW87 121 aaPredicted RBP0.88□□□□□ -2.27
SCAF11-215ENST00000551391 IGKV3D-7A0A0C4DH55 119 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 IGKV3OR2-268A0A0C4DH90 116 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 TRAPPC13A5PLN9 417 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 OR51F1A6NGY5 319 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 H3BT86 120 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 IGKV2D-40P01614 121 aaPredicted RBP0.88□□□□□ -2.27
SCAF11-215ENST00000551391 MSMBP08118 114 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 AQP4P55087 323 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 TNFAIP6P98066 277 aaPredicted RBP0.88□□□□□ -2.27
SCAF11-215ENST00000551391 PPP1R1AQ13522 171 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 MOGQ16653 247 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 C1orf194Q5T5A4 169 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 C9orf64Q5T6V5 341 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 C7orf65Q6ZTY9 151 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 SLC36A1Q7Z2H8 476 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 TMEM86AQ8N2M4 240 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 HDHD2Q9H0R4 259 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 OR51I2Q9H344 312 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 RSL24D1Q9UHA3 163 aaKnown RBP0.88□□□□□ -2.27
SCAF11-215ENST00000551391 ANGPT4Q9Y264 503 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 COL6A6A6NMZ7 2263 aa0.88□□□□□ -2.27
SCAF11-215ENST00000551391 A0A0A6YYH2 397 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 IGKV1D-43A0A0B4J1Z2 117 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 C1orf232A0A0U1RR37 186 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 TMEM269A0A1B0GVZ9 245 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 A6NJ64 397 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 OR4C45A6NMZ5 311 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 LST1O00453 97 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 NSA2O95478 260 aaKnown RBP0.87□□□□□ -2.27
SCAF11-215ENST00000551391 YEATS4O95619 227 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 CRPP02741 224 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 TYMSP04818 313 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 CCL1P22362 96 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 G6PCP35575 357 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 POLR2GP62487 172 aaKnown RBP eCLIP0.87□□□□□ -2.27
SCAF11-215ENST00000551391 RPL30P62888 115 aaKnown RBP0.87□□□□□ -2.27
SCAF11-215ENST00000551391 BATFQ16520 125 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 Q1T7F1 81 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 ARHGAP11BQ3KRB8 267 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 TNFAIP8L3Q5GJ75 292 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 SSX8Q7RTT4 187 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 SLC51BQ86UW2 128 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 MAP1LC3AQ9H492 121 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 FKBP14Q9NWM8 211 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 C15orf41Q9Y2V0 281 aa0.87□□□□□ -2.27
SCAF11-215ENST00000551391 PIK3R4Q99570 1358 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 MEIS3P1A6NDR6 274 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 PFDN6O15212 129 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 APOEP02649 317 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 RPSAP08865 295 aaKnown RBP0.86□□□□□ -2.27
SCAF11-215ENST00000551391 TFPTP0C1Z6 253 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 COX5BP10606 129 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 DEFA4P12838 97 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 MYL12AP19105 171 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 MSNP26038 577 aaKnown RBP0.86□□□□□ -2.27
SCAF11-215ENST00000551391 CASQ1P31415 396 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 HAAOP46952 286 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms