RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 NPFFO15130 113 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
LETMD1-229ENST00000551261 HKR1P10072 659 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 CAV2P51636 162 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 AP2S1P53680 142 aaPredicted RBP11.48□□□□□ -0.57
LETMD1-229ENST00000551261 LINC00205P59089 165 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 UBA52P62987 128 aaKnown RBP11.48□□□□□ -0.57
LETMD1-229ENST00000551261 KLRD1Q13241 179 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 DTD1Q8TEA8 209 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 PHYHIPLQ96FC7 376 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 HIF1ANQ9NWT6 349 aa11.48□□□□□ -0.57
LETMD1-229ENST00000551261 IGHV1-69DA0A0B4J2H0 117 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 TIMM23O14925 209 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 CHST1O43916 411 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 VENTXO95231 258 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 MOSP00540 346 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 IFNA7P01567 189 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 IFNA17P01571 189 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 IGHV1-69P01742 117 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 OR9G9P0C7N8 305 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 DYNLT3P51808 116 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 HSPE1P61604 102 aaKnown RBP11.47□□□□□ -0.57
LETMD1-229ENST00000551261 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
LETMD1-229ENST00000551261 HBG1P69891 147 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 HBG2P69892 147 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 EBI3Q14213 229 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 ZNF266Q14584 549 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 SSX9Q7RTT3 188 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 THNSL2Q86YJ6 484 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 MMD2Q8IY49 270 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 STPG2Q8N412 459 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 OR2T10Q8NGZ9 312 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 STOML3Q8TAV4 291 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 CFHR4Q92496 578 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 C7orf69Q9H7B7 122 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 ENY2Q9NPA8 101 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 PLSCR3Q9NRY6 295 aa11.47□□□□□ -0.57
LETMD1-229ENST00000551261 CENPVL3A0A0U1RRI6 287 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 JTBO76095 146 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 SAA4P35542 130 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 SULT1A1P50225 295 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
LETMD1-229ENST00000551261 HSD17B13Q7Z5P4 300 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-229ENST00000551261 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 RBKSQ9H477 322 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 PSENENQ9NZ42 101 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 KIAA1456Q9P272 454 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 FBN2P35556 2912 aa11.46□□□□□ -0.57
LETMD1-229ENST00000551261 BORCS7-ASMTA0A0B4J1R7 106 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 A0A1W2PN81 502 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 TSPAN9O75954 239 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 DFFBO76075 338 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 IGLV2-23P01705 113 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 FAM106CPP0CH98 169 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 TPT1P13693 172 aaKnown RBP11.45□□□□□ -0.58
LETMD1-229ENST00000551261 CHRNA7P36544 502 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 PRCDQ00LT1 54 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
LETMD1-229ENST00000551261 AANATQ16613 207 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 IZUMO4Q1ZYL8 232 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 VKORC1L1Q8N0U8 176 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 TMEM252Q8N6L7 170 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 Q96MF0 132 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
LETMD1-229ENST00000551261 QTRT1Q9BXR0 403 aaKnown RBP11.45□□□□□ -0.58
LETMD1-229ENST00000551261 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 TCF19Q9Y242 345 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 STRAPQ9Y3F4 350 aaKnown RBP11.45□□□□□ -0.58
LETMD1-229ENST00000551261 HILPDAQ9Y5L2 63 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 OR51B2Q9Y5P1 312 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 U3KQ87 197 aa11.45□□□□□ -0.58
LETMD1-229ENST00000551261 UTP20O75691 2785 aaKnown RBP11.44□□□□□ -0.58
LETMD1-229ENST00000551261 TRAV40A0A0B4J280 105 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
LETMD1-229ENST00000551261 NBR2O15453 112 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 ACTL6BO94805 426 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 NDUFA3O95167 84 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 HOXA1P49639 335 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-229ENST00000551261 F2RL1P55085 397 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 DLX1P56177 255 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 OR2B8PP59922 312 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 SSX2Q16385 188 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 LHFPL4Q7Z7J7 247 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 KRTAP1-3Q8IUG1 177 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 NPBQ8NG41 125 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 OR1L8Q8NGR8 309 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 PINX1Q96BK5 328 aaKnown RBP11.44□□□□□ -0.58
LETMD1-229ENST00000551261 ZNF471Q9BX82 626 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-229ENST00000551261 PLEKHA3Q9HB20 300 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
LETMD1-229ENST00000551261 ABCA2Q9BZC7 2435 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms