RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RRHO14718 337 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 APELAP0DMC3 54 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 ST6GALNAC6Q969X2 333 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 KCNS1Q96KK3 526 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 NEU1Q99519 415 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 IGHV3OR15-7A0A075B7D8 119 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 SNCGO76070 127 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 ARF6P62330 175 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF841Q6ZN19 808 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM136Q6ZRR5 245 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 TP53BP1Q12888 1972 aaPredicted RBP13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 AGFG2O95081 481 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 TFPI2P48307 235 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 TWIST1Q15672 202 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 SCNM1Q9BWG6 230 aa13.47□□□□□ -0.25
RBFOX1-212ENST00000550418 HBBP68871 147 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 GREB1Q4ZG55 1949 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 SCO2A0A1W2PP80 73 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 TCF23Q7RTU1 214 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 CALHM1Q8IU99 346 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 HIST1H4GQ99525 98 aa13.46□□□□□ -0.25
RBFOX1-212ENST00000550418 TRGV8A0A0C4DH27 118 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 ODAMA1E959 279 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 FAM157AC9JC47 383 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 ERASQ7Z444 233 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 GATAD1Q8WUU5 269 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 GTF3AQ92664 365 aaKnown RBP13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 RTN4RQ9BZR6 473 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 SCN5AQ14524 2016 aa13.46□□□□□ -0.26
RBFOX1-212ENST00000550418 SPAARA0A1B0GVQ0 90 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 A6NNC1 897 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 OR4A8P0C604 315 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 TFF3Q07654 80 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 ZNF502Q8TBZ5 544 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 SGK494Q96LW2 274 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 CEACAM3P40198 252 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 REG1BP48304 166 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 GNB2P62879 340 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 ZNF826PQ6ZT77 177 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 SCARF2Q96GP6 870 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 CHD5Q8TDI0 1954 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 IGHV5-10-1A0A0J9YXX1 117 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 RSPO4Q2I0M5 234 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 INSIG2Q9Y5U4 225 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 M0R3E3 92 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 CEACAM1P13688 526 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 ADMP35318 185 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 FBLN7Q53RD9 439 aa13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 SRSF12Q8WXF0 261 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-212ENST00000550418 RPL8P62917 257 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 ID3Q02535 119 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 FAM89BQ8N5H3 189 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 CT55Q8WUE5 264 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 A0A1B0GW64 132 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 B4E171 279 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 IL6RP08887 468 aaPredicted RBP13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 RND2P52198 227 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 SUPT4H1P63272 117 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 TNFSF13O75888 250 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 C1QTNF9P0C862 333 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 C1orf194Q5T5A4 169 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 SPANXN1Q5VSR9 72 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 ZDHHC16Q969W1 377 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 C1QTNF9BB2RNN3 333 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 GDF9O60383 454 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 OR51G1Q8NGK1 321 aa13.44□□□□□ -0.26
RBFOX1-212ENST00000550418 CGAP01215 116 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 CELA2AP08217 269 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 UCP2P55851 309 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 PDCD11Q14690 1871 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 SRSF4Q08170 494 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 LHFPL1Q86WI0 220 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 GRAMD2BQ96HH9 432 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 WDR81Q562E7 1941 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 MMDQ15546 238 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 MBD3L1Q8WWY6 194 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 FREM3P0C091 2139 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 ESPL1Q14674 2120 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 MDC1Q14676 2089 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 LINC00614P0C842 121 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 SOX8P57073 446 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 BHLHA15Q7RTS1 189 aaPredicted RBP13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 GCSAMQ8N6F7 178 aa13.43□□□□□ -0.26
RBFOX1-212ENST00000550418 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 GBF1Q92538 1859 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 TGFBR3LH3BV60 316 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 SNAI2O43623 268 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 LRTM2Q8N967 370 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 TMEM54Q969K7 222 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 IGKV1-9A0A0C4DH69 117 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 COX5BP10606 129 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms