RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 OR51J1Q9H342 316 aa10.28□□□□□ -0.76
RAB5C-206ENST00000550406 BEX1Q9HBH7 125 aa10.28□□□□□ -0.76
RAB5C-206ENST00000550406 RNF114Q9Y508 228 aa10.28□□□□□ -0.76
RAB5C-206ENST00000550406 TRAV6A0A075B6T7 132 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 UPK2O00526 184 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 KBTBD11O94819 623 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 OR2A4O95047 310 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 IGKV1-5P01602 117 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 OR9G9P0C7N8 305 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 MYOD1P15172 320 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 VDAC2P45880 294 aaPredicted RBP10.27□□□□□ -0.77
RAB5C-206ENST00000550406 PPP1R1AQ13522 171 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 C10orf99Q6UWK7 81 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 ZNF562Q6V9R5 426 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 NRARPQ7Z6K4 114 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 CADM3Q8N126 398 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 DUSP18Q8NEJ0 188 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 TMEM56Q96MV1 263 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 OR2A7Q96R45 310 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 C20orf85Q9H1P6 137 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 TMEM140Q9NV12 185 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 BET1LQ9NYM9 111 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 TMEM56-RWDD3S4R434 201 aa10.27□□□□□ -0.77
RAB5C-206ENST00000550406 A0A0G2JRQ6 117 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 A0A1B0GW64 132 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 MARCH11A6NNE9 402 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 E7EUB6 86 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 B3GALNT1O75752 331 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 SFT2D2O95562 160 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 SERPINE2P07093 398 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 SPNP16150 400 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 MECP2P51608 486 aaKnown RBP10.26□□□□□ -0.77
RAB5C-206ENST00000550406 FXYD3Q14802 87 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 IZUMO4Q1ZYL8 232 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 ANKRD55Q3KP44 614 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 C19orf54Q5BKX5 351 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 DMBX1Q8NFW5 382 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 NUBP2Q9Y5Y2 271 aa10.26□□□□□ -0.77
RAB5C-206ENST00000550406 A0A1B0GUS0 222 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 DBX1A6NMT0 343 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 G3V318 75 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 IGF1P05019 195 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 H2AFB2P0C5Z0 115 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 OR4E1P0C645 316 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 CRIP2P52943 208 aaPredicted RBP10.25□□□□□ -0.77
RAB5C-206ENST00000550406 UBE2MP61081 183 aaKnown RBP10.25□□□□□ -0.77
RAB5C-206ENST00000550406 CFHR3Q02985 330 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 SRSF4Q08170 494 aaKnown RBP10.25□□□□□ -0.77
RAB5C-206ENST00000550406 TRIM16LQ309B1 348 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 C10orf55Q5SWW7 151 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 Q6ZRM9 215 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 STPG2Q8N412 459 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 KLHDC1Q8N7A1 406 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 OR4A5Q8NH83 315 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 VSTM2AQ8TAG5 236 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 AIFM2Q9BRQ8 373 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 FAM103A1Q9BTL3 118 aaKnown RBP10.25□□□□□ -0.77
RAB5C-206ENST00000550406 ALX4Q9H161 411 aaPredicted RBP10.25□□□□□ -0.77
RAB5C-206ENST00000550406 NUDT15Q9NV35 164 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 KCNIP3Q9Y2W7 256 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 NSG2Q9Y328 171 aa10.25□□□□□ -0.77
RAB5C-206ENST00000550406 C9orf170A2RU37 121 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 HAX1O00165 279 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 AP4M1O00189 453 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 KCNAB3O43448 404 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 DEFA1P59665 94 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 DEFA3P59666 94 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 ERVK-16P61578 105 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 GNB1P62873 340 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 DHRS2Q13268 280 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 TNXAQ16473 311 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 ARSJQ5FYB0 599 aaPredicted RBP10.24□□□□□ -0.77
RAB5C-206ENST00000550406 ASPHD1Q5U4P2 390 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 TMEM268Q5VZI3 342 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 LYZL2Q7Z4W2 148 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 OR52B4Q8NGK2 314 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 WFDC12Q8WWY7 111 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 RBPMSQ93062 196 aaKnown RBP10.24□□□□□ -0.77
RAB5C-206ENST00000550406 GPR146Q96CH1 333 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 PARP11Q9NR21 331 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
RAB5C-206ENST00000550406 A0A0B4J293 547 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 CNIH1O95406 144 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 VAMP1P23763 118 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 PPIFP30405 207 aaKnown RBP10.23□□□□□ -0.77
RAB5C-206ENST00000550406 RAB25P57735 213 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 RPL8P62917 257 aaKnown RBP10.23□□□□□ -0.77
RAB5C-206ENST00000550406 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 H2BFWTQ7Z2G1 175 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 LYG2Q86SG7 212 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 ZNF695Q8IW36 515 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 FOXRED2Q8IWF2 684 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms