RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 C19orf84I3L1E1 186 aa17.08■□□□□ 0.32
PRDM4-205ENST00000550376 OR13C7P0DN81 318 aa17.08■□□□□ 0.32
PRDM4-205ENST00000550376 TCF19Q9Y242 345 aa17.08■□□□□ 0.32
PRDM4-205ENST00000550376 PLXNB1O43157 2135 aa17.08■□□□□ 0.32
PRDM4-205ENST00000550376 MYO18BQ8IUG5 2567 aa17.08■□□□□ 0.32
PRDM4-205ENST00000550376 NDUFS7O75251 213 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 SFTPCP11686 197 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 CEBPGP53567 150 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 SPCS3P61009 180 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 ZNF726P1Q15940 193 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 TMEM155Q4W5P6 130 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 ZNF841Q6ZN19 808 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 TMEM170AQ8WVE7 144 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 IGHV3-72A0A0B4J1Y9 119 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 J3QR06 171 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 PPIHO43447 177 aaKnown RBP17.07■□□□□ 0.32
PRDM4-205ENST00000550376 AKR1C3P42330 323 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 KIR2DS2P43631 304 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 C10orf91Q5T1B1 145 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 CIB3Q96Q77 187 aaPredicted RBP17.07■□□□□ 0.32
PRDM4-205ENST00000550376 AIFM2Q9BRQ8 373 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 SEC11CQ9BY50 192 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 USP24Q9UPU5 2620 aa17.07■□□□□ 0.32
PRDM4-205ENST00000550376 DNASE2O00115 360 aaPredicted RBP17.06■□□□□ 0.32
PRDM4-205ENST00000550376 IGKV1D-33P01593 117 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 IGKV1-33P01594 117 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 HOXA1P49639 335 aaPredicted RBP17.06■□□□□ 0.32
PRDM4-205ENST00000550376 ZNF833PQ6ZTB9 187 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 SVBPQ8N300 66 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 IGHV1-8P0DP01 117 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 FGF7P21781 194 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 VDAC2P45880 294 aaPredicted RBP17.06■□□□□ 0.32
PRDM4-205ENST00000550376 CBLN2Q8IUK8 224 aa17.06■□□□□ 0.32
PRDM4-205ENST00000550376 USP9XQ93008 2570 aaPredicted RBP17.06■□□□□ 0.32
PRDM4-205ENST00000550376 SMCO3A2RU48 225 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 IGHV2-70P01814 119 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 CDKN1AP38936 164 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 RAB2AP61019 212 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 FAM216AQ8WUB2 273 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 RITA1Q96K30 269 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 CARHSP1Q9Y2V2 147 aaKnown RBP17.05■□□□□ 0.32
PRDM4-205ENST00000550376 C15orf61A6NNL5 157 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 ACSM6Q6P461 480 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 ITLN2Q8WWU7 325 aaPredicted RBP17.05■□□□□ 0.32
PRDM4-205ENST00000550376 C20orf24Q9BUV8 137 aa17.05■□□□□ 0.32
PRDM4-205ENST00000550376 RTL8BQ17RB0 113 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 IGFBPL1Q8WX77 278 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 ADTRPQ96IZ2 230 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 CBLN4Q9NTU7 201 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 NDUFA2O43678 99 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 SAA1P0DJI8 122 aaPredicted RBP17.04■□□□□ 0.32
PRDM4-205ENST00000550376 TMEM147Q9BVK8 224 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 HIPK2Q9H2X6 1198 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 OR51B2Q9Y5P1 312 aa17.04■□□□□ 0.32
PRDM4-205ENST00000550376 SPG11Q96JI7 2443 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 H0YJW9 148 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 PEA15Q15121 130 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 AARDQ4LEZ3 155 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 RAB1BQ9H0U4 201 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 WNK2Q9Y3S1 2297 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 RBFOX3A6NFN3 312 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 HRASP01112 189 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 IFNA4P05014 189 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 COX7A1P24310 79 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 PPOXP50336 477 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 TLE4Q04727 773 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 RPP25LQ8N5L8 163 aaKnown RBP17.03■□□□□ 0.32
PRDM4-205ENST00000550376 OR10A7Q8NGE5 316 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 RCC1LQ96I51 464 aaKnown RBP17.03■□□□□ 0.32
PRDM4-205ENST00000550376 TMEM14BQ9NUH8 114 aa17.03■□□□□ 0.32
PRDM4-205ENST00000550376 OR8U8P0C7N1 319 aa17.02■□□□□ 0.32
PRDM4-205ENST00000550376 PAX6P26367 422 aa17.02■□□□□ 0.32
PRDM4-205ENST00000550376 RXFP4Q8TDU9 374 aa17.02■□□□□ 0.32
PRDM4-205ENST00000550376 PINX1Q96BK5 328 aaKnown RBP17.02■□□□□ 0.32
PRDM4-205ENST00000550376 HARBI1Q96MB7 349 aa17.02■□□□□ 0.32
PRDM4-205ENST00000550376 GNG13Q9P2W3 67 aa17.02■□□□□ 0.32
PRDM4-205ENST00000550376 FAM90A9PA6NNJ1 464 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 ARG1P05089 322 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 GNB2P62879 340 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 GCSAMLQ5JQS6 135 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 C11orf71Q6IPW1 123 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 OR10W1Q8NGF6 305 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 FAM122AQ96E09 287 aa17.02■□□□□ 0.31
PRDM4-205ENST00000550376 PPIAL4CA0A0B4J2A2 164 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 PPIAL4GP0DN37 164 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 HSPE1P61604 102 aaKnown RBP17.01■□□□□ 0.31
PRDM4-205ENST00000550376 ZNF429Q86V71 674 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 CLCC1Q96S66 551 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 TMEM133Q9H2Q1 129 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 UBTD1Q9HAC8 227 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 ZFP92A6NM28 416 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 E7EUB6 86 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 ENSAO43768 121 aaKnown RBP17.01■□□□□ 0.31
PRDM4-205ENST00000550376 SP5Q6BEB4 398 aaPredicted RBP17.01■□□□□ 0.31
PRDM4-205ENST00000550376 NABP2Q9BQ15 211 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 NPCDR1Q9BY65 106 aa17.01■□□□□ 0.31
PRDM4-205ENST00000550376 TMEM30BQ3MIR4 351 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 COMMD1Q8N668 190 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 OR52E5Q8NH55 327 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 OR9G1Q8NH87 305 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms